RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 GAGE12FP0CL80 117 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 GAGE12GP0CL81 117 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 GAGE12IP0CL82 117 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 FOLR3P41439 243 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 GAGE4Q13068 117 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 CATR1Q13166 79 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 ZADH2Q8N4Q0 377 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 ZNF747Q9BV97 191 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 DMXL1Q9Y485 3027 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 C15orf62A8K5M9 175 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 DNPH1O43598 174 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 PPP1R32Q7Z5V6 425 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 C8orf46Q8TAG6 207 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 SSBP3Q9BWW4 388 aaPredicted RBP8.45□□□□□ -1.06
VPS11-207ENST00000620429 GCM1Q9NP62 436 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 HIGD1BQ9P298 99 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 DUSP13Q9UII6 198 aa8.45□□□□□ -1.06
VPS11-207ENST00000620429 A0A096LPE4 126 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 A0A1W2PPZ6 126 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 C5orf49A4QMS7 147 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 FABP5P3A8MUU1 101 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 H3BMG7 143 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 FOXC1Q12948 553 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 EFNB3Q15768 340 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 MIC13Q5XKP0 118 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 Q8TCH9 128 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 MGST2Q99735 147 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 SLC25A10Q9UBX3 287 aaPredicted RBP8.44□□□□□ -1.06
VPS11-207ENST00000620429 VPREB3Q9UKI3 123 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 ACACBO00763 2458 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 AHCTF1Q8WYP5 2266 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 NCOR2Q9Y618 2525 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 CAMPP49913 170 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 FXYD2P54710 66 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 B3GALT5-AS1P59052 145 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 GNG3P63215 75 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 Q6ZR03 302 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 GGNQ86UU5 652 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 ZDHHC16Q969W1 377 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 SCNM1Q9BWG6 230 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 VCX2Q9H322 139 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 HEYLQ9NQ87 328 aaPredicted RBP8.44□□□□□ -1.06
VPS11-207ENST00000620429 TMEM167BQ9NRX6 74 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 POLDIP2Q9Y2S7 368 aa8.44□□□□□ -1.06
VPS11-207ENST00000620429 CACNA1DQ01668 2161 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 DOCK7Q96N67 2140 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 IGLL5B9A064 214 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 RFPL3SP0C7P2 107 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 FOXA3P55318 350 aaPredicted RBP8.43□□□□□ -1.06
VPS11-207ENST00000620429 ATP5J2P56134 94 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 TMPRSS3P57727 454 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 HBBP68871 147 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 FHL3Q13643 280 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 TEX29Q8N6K0 151 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.43□□□□□ -1.06
VPS11-207ENST00000620429 PCSK5Q92824 1860 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 SNRNP40Q96DI7 357 aaKnown RBP8.43□□□□□ -1.06
VPS11-207ENST00000620429 ZNF355PQ9NSJ1 428 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 NCR2O95944 276 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 G6PCP35575 357 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 LGALS9BQ3B8N2 356 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 LGALS9CQ6DKI2 356 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 FAM214BQ7L5A3 538 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 DRAM1Q8N682 238 aa8.43□□□□□ -1.06
VPS11-207ENST00000620429 SOX21Q9Y651 276 aaPredicted RBP8.43□□□□□ -1.06
VPS11-207ENST00000620429 ASPMQ8IZT6 3477 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 A0A1W2PNU3 283 aaPredicted RBP8.42□□□□□ -1.06
VPS11-207ENST00000620429 FAM90A9PA6NNJ1 464 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 HIGD1CA8MV81 97 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 FOXH1O75593 365 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 NGFP01138 241 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 C5orf47Q569G3 176 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 LINC00596Q86U02 117 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 BCL6BQ8N143 479 aaPredicted RBP8.42□□□□□ -1.06
VPS11-207ENST00000620429 PIP4P2Q8N4L2 257 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 CENPVL3A0A0U1RRI6 287 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 A0A1B0GWB2 263 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 A8MWL6 223 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 MGST3O14880 152 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 SRD5A1P18405 259 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 PSG5Q15238 335 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 PRELID3AQ96N28 172 aa8.42□□□□□ -1.06
VPS11-207ENST00000620429 PINLYPA6NC86 204 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 PRSS29PA6NIE9 313 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 CT45A10P0DMU9 189 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 GCSHP23434 173 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 ACP1P24666 158 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 ERVK11-1P61568 191 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 ZNF816Q0VGE8 651 aaPredicted RBP8.41□□□□□ -1.06
VPS11-207ENST00000620429 TMEM116Q8NCL8 245 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 PRRG4Q9BZD6 226 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 USP24Q9UPU5 2620 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 FAM90A27PA6NNH2 459 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 MRPL33O75394 65 aaKnown RBP8.41□□□□□ -1.06
VPS11-207ENST00000620429 PIFOQ8TCI5 191 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 TMUB1Q9BVT8 246 aa8.41□□□□□ -1.06
VPS11-207ENST00000620429 LSM4Q9Y4Z0 139 aaKnown RBP8.41□□□□□ -1.06
VPS11-207ENST00000620429 MAP1BP46821 2468 aaKnown RBP8.4□□□□□ -1.06
VPS11-207ENST00000620429 K7ERJ3 54 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms