RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 TMEM219Q86XT9 240 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 NECAP1Q8NC96 275 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 TGIF2-C20orf24A0A0A6YYL0 155 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 IGHV1-69DA0A0B4J2H0 117 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 IGHV1-69P01742 117 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 MSMBP08118 114 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 IGHV4-38-2P0DP08 117 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 PSG1P11464 419 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 LYZP61626 148 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 C16orf82Q7Z2V1 217 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 PAXXQ9BUH6 204 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 C7orf69Q9H7B7 122 aa15.91■□□□□ 0.14
MMP28-207ENST00000619655 ELOA3CA0A087WX78 387 aaPredicted RBP15.9■□□□□ 0.14
MMP28-207ENST00000619655 CLDN34H7C241 214 aa15.9■□□□□ 0.14
MMP28-207ENST00000619655 NDUFS6O75380 124 aaKnown RBP15.9■□□□□ 0.14
MMP28-207ENST00000619655 CXCL1P09341 107 aa15.9■□□□□ 0.14
MMP28-207ENST00000619655 LEMD1Q68G75 181 aa15.9■□□□□ 0.14
MMP28-207ENST00000619655 TRBV20OR9-2A0A075B6H5 130 aa15.9■□□□□ 0.14
MMP28-207ENST00000619655 HYPMO75409 117 aa15.9■□□□□ 0.14
MMP28-207ENST00000619655 SUMO1P63165 101 aaKnown RBP15.9■□□□□ 0.14
MMP28-207ENST00000619655 OR1L6Q8NGR2 347 aa15.9■□□□□ 0.14
MMP28-207ENST00000619655 A0A0U1RQK1 487 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 CXorf65A6NEN9 183 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 NPIPB5A8MRT5 1133 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 GGTLC3B5MD39 225 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 CRYBB3P26998 211 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 ECSCRQ19T08 205 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 LINC01551Q86U37 167 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 FANCD2OSQ96PS1 177 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 SOX21Q9Y651 276 aaPredicted RBP15.89■□□□□ 0.13
MMP28-207ENST00000619655 ABCA12Q86UK0 2595 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 IGHV3-23P01764 117 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 TMUB1Q9BVT8 246 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 HIF1ANQ9NWT6 349 aa15.89■□□□□ 0.13
MMP28-207ENST00000619655 CHD6Q8TD26 2715 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 EGR2P11161 476 aaPredicted RBP15.88■□□□□ 0.13
MMP28-207ENST00000619655 RPS10P46783 165 aaKnown RBP15.88■□□□□ 0.13
MMP28-207ENST00000619655 TTC9CQ8N5M4 171 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 USP9YO00507 2555 aaPredicted RBP15.88■□□□□ 0.13
MMP28-207ENST00000619655 IGLV11-55A0A075B6I3 123 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 AP4M1O00189 453 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 OR2J3O76001 311 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 IGKV1-17P01599 117 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 HLA-DRB1P01911 266 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 KRTAP10-9P60411 292 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 MAPK1IP1LQ8NDC0 245 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 TMEM242Q9NWH2 141 aa15.88■□□□□ 0.13
MMP28-207ENST00000619655 NBPF19A0A087WUL8 3843 aa15.87■□□□□ 0.13
MMP28-207ENST00000619655 PTPN13Q12923 2485 aa15.87■□□□□ 0.13
MMP28-207ENST00000619655 RD3LP0DJH9 198 aa15.87■□□□□ 0.13
MMP28-207ENST00000619655 BLNKQ8WV28 456 aa15.87■□□□□ 0.13
MMP28-207ENST00000619655 CTDSP1Q9GZU7 261 aa15.87■□□□□ 0.13
MMP28-207ENST00000619655 H7BYZ3 331 aa15.86■□□□□ 0.13
MMP28-207ENST00000619655 ATP6V0E1O15342 81 aa15.86■□□□□ 0.13
MMP28-207ENST00000619655 GNG7O60262 68 aa15.86■□□□□ 0.13
MMP28-207ENST00000619655 B4DSR2 109 aa15.86■□□□□ 0.13
MMP28-207ENST00000619655 DSCR9P59020 149 aa15.86■□□□□ 0.13
MMP28-207ENST00000619655 UNQ5815/PRO19632Q6UWF5 114 aa15.86■□□□□ 0.13
MMP28-207ENST00000619655 HIGD1AQ9Y241 93 aa15.86■□□□□ 0.13
MMP28-207ENST00000619655 ARL2-SNX15V9GYD0 113 aa15.86■□□□□ 0.13
MMP28-207ENST00000619655 A0A1W2PRE2 83 aa15.85■□□□□ 0.13
MMP28-207ENST00000619655 LINC01548A6NM66 108 aa15.85■□□□□ 0.13
MMP28-207ENST00000619655 GATCO43716 136 aaKnown RBP15.85■□□□□ 0.13
MMP28-207ENST00000619655 Q56UQ5 140 aa15.85■□□□□ 0.13
MMP28-207ENST00000619655 FXYD5Q96DB9 178 aa15.85■□□□□ 0.13
MMP28-207ENST00000619655 TENM4Q6N022 2769 aa15.85■□□□□ 0.13
MMP28-207ENST00000619655 NDUFB8O95169 186 aa15.85■□□□□ 0.13
MMP28-207ENST00000619655 C11orf52Q96A22 123 aa15.85■□□□□ 0.13
MMP28-207ENST00000619655 ELOVL1Q9BW60 279 aa15.85■□□□□ 0.13
MMP28-207ENST00000619655 ZANQ9Y493 2812 aa15.85■□□□□ 0.13
MMP28-207ENST00000619655 H3BTX0 84 aa15.84■□□□□ 0.13
MMP28-207ENST00000619655 OCC1Q8TAD7 63 aa15.84■□□□□ 0.13
MMP28-207ENST00000619655 THYN1Q9P016 225 aa15.84■□□□□ 0.13
MMP28-207ENST00000619655 GALR1P47211 349 aa15.84■□□□□ 0.13
MMP28-207ENST00000619655 RANP62826 216 aaKnown RBP15.84■□□□□ 0.13
MMP28-207ENST00000619655 SGMS2Q8NHU3 365 aa15.84■□□□□ 0.13
MMP28-207ENST00000619655 HELTA6NFD8 242 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 SLC25A16P16260 332 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 MFAP4P55083 255 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 LY6EQ16553 131 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 C5orf56Q8N8D9 126 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 OR5B12Q96R08 314 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 C21orf62Q9NYP8 219 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 G3V318 75 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 AVPP01185 164 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 IL4P05112 153 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 PLP1P60201 277 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 FBXL7Q9UJT9 491 aa15.83■□□□□ 0.12
MMP28-207ENST00000619655 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.82■□□□□ 0.12
MMP28-207ENST00000619655 OR2T8A6NH00 312 aa15.82■□□□□ 0.12
MMP28-207ENST00000619655 PAX1P15863 534 aa15.82■□□□□ 0.12
MMP28-207ENST00000619655 STXBP6Q8NFX7 210 aa15.82■□□□□ 0.12
MMP28-207ENST00000619655 PIFOQ8TCI5 191 aa15.82■□□□□ 0.12
MMP28-207ENST00000619655 ANAPC16Q96DE5 110 aa15.82■□□□□ 0.12
MMP28-207ENST00000619655 FAM210BQ96KR6 192 aa15.82■□□□□ 0.12
MMP28-207ENST00000619655 SLC25A39Q9BZJ4 359 aaPredicted RBP15.82■□□□□ 0.12
MMP28-207ENST00000619655 CENPWQ5EE01 88 aa15.82■□□□□ 0.12
MMP28-207ENST00000619655 C9orf152Q5JTZ5 239 aa15.82■□□□□ 0.12
MMP28-207ENST00000619655 MDFIC2A0A1B0GVS7 189 aa15.81■□□□□ 0.12
MMP28-207ENST00000619655 GNG4P50150 75 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms