RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 WDR83OSQ9Y284 106 aa11.36□□□□□ -0.59
CIITA-213ENST00000618327 SHISA9B4DS77 424 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 GPR183P32249 361 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 SP5Q6BEB4 398 aaPredicted RBP11.35□□□□□ -0.59
CIITA-213ENST00000618327 AMMECR1LQ6DCA0 310 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 Q6ZRM9 215 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 TMEM167AQ8TBQ9 72 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 SHANK1Q9Y566 2161 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 TFPI2P48307 235 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 CYTL1Q9NRR1 136 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 PIEZO2Q9H5I5 2752 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 FOXI3A8MTJ6 420 aaPredicted RBP11.35□□□□□ -0.59
CIITA-213ENST00000618327 NUDT3O95989 172 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 PRTN3P24158 256 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 RNF5Q99942 180 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 FOXA3P55318 350 aaPredicted RBP11.35□□□□□ -0.59
CIITA-213ENST00000618327 DMRTA2Q96SC8 542 aa11.35□□□□□ -0.59
CIITA-213ENST00000618327 NBEAP1P0C6P0 100 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 PSG9Q00887 426 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 IGHV3OR16-13A0A075B7E8 117 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 IGHV3-74A0A0B4J1X5 117 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 A0A0G2JLM5 398 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.34□□□□□ -0.59
CIITA-213ENST00000618327 SRP19P09132 144 aaKnown RBP11.34□□□□□ -0.59
CIITA-213ENST00000618327 FAM71F2Q6NXP2 309 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 NDUFAF3Q9BU61 184 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 TMEM14EPQ6UXP3 125 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 SGK494Q96LW2 274 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
CIITA-213ENST00000618327 C7orf71A4D174 169 aa11.33□□□□□ -0.59
CIITA-213ENST00000618327 HAX1O00165 279 aa11.33□□□□□ -0.59
CIITA-213ENST00000618327 FGF16O43320 207 aa11.33□□□□□ -0.59
CIITA-213ENST00000618327 IGKV1-16P04430 117 aa11.33□□□□□ -0.59
CIITA-213ENST00000618327 C17orf58Q2M2W7 97 aa11.33□□□□□ -0.59
CIITA-213ENST00000618327 FAM53AQ6NSI3 398 aaPredicted RBP11.33□□□□□ -0.59
CIITA-213ENST00000618327 MIR17HGQ75NE6 70 aa11.33□□□□□ -0.59
CIITA-213ENST00000618327 TUBA4BQ9H853 241 aa11.33□□□□□ -0.59
CIITA-213ENST00000618327 LOXP28300 417 aaPredicted RBP11.33□□□□□ -0.6
CIITA-213ENST00000618327 CENPWQ5EE01 88 aa11.33□□□□□ -0.6
CIITA-213ENST00000618327 TBL2Q9Y4P3 447 aaKnown RBP11.33□□□□□ -0.6
CIITA-213ENST00000618327 SOX21Q9Y651 276 aaPredicted RBP11.33□□□□□ -0.6
CIITA-213ENST00000618327 OR11H12B2RN74 326 aa11.33□□□□□ -0.6
CIITA-213ENST00000618327 OR11H1Q8NG94 326 aa11.33□□□□□ -0.6
CIITA-213ENST00000618327 OR11H2Q8NH07 326 aa11.33□□□□□ -0.6
CIITA-213ENST00000618327 SMIM13P0DJ93 91 aa11.33□□□□□ -0.6
CIITA-213ENST00000618327 CLEC19AQ6UXS0 136 aa11.33□□□□□ -0.6
CIITA-213ENST00000618327 YAE1D1Q9NRH1 226 aa11.33□□□□□ -0.6
CIITA-213ENST00000618327 NUP210LQ5VU65 1888 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 TM4SF20Q53R12 229 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 TREML4Q6UXN2 200 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 OR10J6PQ8NGY7 276 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 CLDND2Q8NHS1 167 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 C15orf65H3BRN8 121 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 NDUFS8O00217 210 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 PRDM13Q9H4Q3 707 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 CGB1A6NKQ9 187 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 MYOD1P15172 320 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 RPS20P60866 119 aaKnown RBP11.32□□□□□ -0.6
CIITA-213ENST00000618327 BRD3OSQ6XYD6 125 aa11.32□□□□□ -0.6
CIITA-213ENST00000618327 EML6Q6ZMW3 1958 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 A0A087WWC5 75 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 TCRBV4S1A1TA0A5B7 111 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 NPFFO15130 113 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 LYL1P12980 280 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 SLC25A16P16260 332 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 PRR14LQ5THK1 2151 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 NPFFR1Q9GZQ6 430 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 KLK15Q9H2R5 256 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 TLN1Q9Y490 2541 aaKnown RBP11.31□□□□□ -0.6
CIITA-213ENST00000618327 IGHV3OR16-8A0A075B7F1 116 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 IGHV3-49A0A0A0MS15 119 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 HBBP68871 147 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
CIITA-213ENST00000618327 GOLT1AQ6ZVE7 132 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 ZNF414Q96IQ9 312 aa11.31□□□□□ -0.6
CIITA-213ENST00000618327 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 RHOGP84095 191 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 C5orf64Q2M2E5 130 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 EBLN2Q6P2I7 272 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 TTC9CQ8N5M4 171 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 BEND2Q8NDZ0 799 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 IMMP2LQ96T52 175 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 SIGLEC9Q9Y336 463 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 SMAGPQ0VAQ4 97 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 ICAM4Q14773 271 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 SPOCK3Q9BQ16 436 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 MOB4Q9Y3A3 225 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 HTTP42858 3142 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 A0A1B0GWB2 263 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 IGHV3-11P01762 117 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
CIITA-213ENST00000618327 ADORA2A-AS1P86434 159 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 KAAG1Q9UBP8 84 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 LAMTOR2Q9Y2Q5 125 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 ATP5G3P48201 142 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 C19orf54Q5BKX5 351 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 GCSAMLQ5JQS6 135 aa11.3□□□□□ -0.6
CIITA-213ENST00000618327 TMEM219Q86XT9 240 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms