RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 TICRRQ7Z2Z1 1910 aa7.83□□□□□ -1.16
COL12A1-211ENST00000615798 IGHV1OR21-1A0A087WYE8 117 aa7.83□□□□□ -1.16
COL12A1-211ENST00000615798 CRIM1Q9NZV1 1036 aa7.83□□□□□ -1.16
COL12A1-211ENST00000615798 ZNF488Q96MN9 340 aa7.83□□□□□ -1.16
COL12A1-211ENST00000615798 SRSF8Q9BRL6 282 aaKnown RBP7.83□□□□□ -1.16
COL12A1-211ENST00000615798 PLXNA3P51805 1871 aa7.83□□□□□ -1.16
COL12A1-211ENST00000615798 RLFQ13129 1914 aa7.83□□□□□ -1.16
COL12A1-211ENST00000615798 CCL4L1Q8NHW4 92 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 TRBV24-1A0A075B6N3 115 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 RNASE4P34096 147 aaKnown RBP7.82□□□□□ -1.16
COL12A1-211ENST00000615798 UCP2P55851 309 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 LYRM9A8MSI8 78 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 IGHV3-13P01766 116 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 IGHV3-7P01780 117 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 KLF5Q13887 457 aaPredicted RBP7.82□□□□□ -1.16
COL12A1-211ENST00000615798 A0A1B0GW64 132 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 PIGYQ3MUY2 71 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 LAIR2Q6ISS4 152 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 MRPL27Q9P0M9 148 aaKnown RBP7.82□□□□□ -1.16
COL12A1-211ENST00000615798 PILRAQ9UKJ1 303 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 IGHV3OR16-12A0A075B7B8 117 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 NDUFA2O43678 99 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 TRAV12-2A0A075B6T6 113 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 GFERP55789 205 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 IFI27L2Q9H2X8 130 aa7.82□□□□□ -1.16
COL12A1-211ENST00000615798 ZNF708P17019 499 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 CCL20P78556 96 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 TRBV5-7A0A0A0MS05 114 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 NYNRINQ9P2P1 1898 aaKnown RBP7.81□□□□□ -1.16
COL12A1-211ENST00000615798 COLCA2A8K830 154 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 ADARB2-AS1A8MUL3 147 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 TMPRSS2O15393 492 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 EGR1P18146 543 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 COL9A1P20849 921 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 LYPD6BQ8NI32 183 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 VWA8A3KMH1 1905 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 THBDP07204 575 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 IGHV1-24A0A0C4DH33 117 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 PSMB8P28062 276 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 HLA-DMBP28068 263 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 A0A1W2PPC1 479 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 NDUFS5O43920 106 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 C8orf31Q8N9H6 132 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 TSKUQ8WUA8 353 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 HEXA-AS1Q9H8Q6 139 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 FOXD3Q9UJU5 478 aaPredicted RBP7.81□□□□□ -1.16
COL12A1-211ENST00000615798 SMIM10L1P0DMW3 83 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 SMIM10Q96HG1 83 aa7.81□□□□□ -1.16
COL12A1-211ENST00000615798 A0A0B4J2C4 111 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 H2BFSP57053 126 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 SLC50A1Q9BRV3 221 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 FAM236AA0A1B0GUQ0 79 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 FAM236BA0A1B0GV22 79 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 J3QT63 122 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 TMEM30BQ3MIR4 351 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 TEX45Q8NA69 505 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 PATE1Q8WXA2 126 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 IGHV3-64A0A075B6Q5 118 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 PTCRAQ6ISU1 281 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-211ENST00000615798 STPG4Q8N801 248 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 ZNF83P51522 516 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 DTX2Q86UW9 622 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 NRN1LQ496H8 165 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 VGLL1Q99990 258 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 IL6RP08887 468 aaPredicted RBP7.8□□□□□ -1.16
COL12A1-211ENST00000615798 PEMTQ9UBM1 199 aa7.8□□□□□ -1.16
COL12A1-211ENST00000615798 RNASE2P10153 161 aaKnown RBP7.79□□□□□ -1.16
COL12A1-211ENST00000615798 HOXB3P14651 431 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-211ENST00000615798 EGR4Q05215 589 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 FAM27BQ5VT28 67 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 MORN5Q5VZ52 161 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 hCG_38984A0A1B0GV85 526 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 F8VVB4 439 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 F8VWA3 439 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 NBEAP1P0C6P0 100 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 HCP5Q6MZN7 132 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 GCSAMQ8N6F7 178 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 RNASE7Q9H1E1 156 aaKnown RBP7.79□□□□□ -1.16
COL12A1-211ENST00000615798 TNRC6BQ9UPQ9 1833 aaKnown RBP7.79□□□□□ -1.16
COL12A1-211ENST00000615798 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.79□□□□□ -1.16
COL12A1-211ENST00000615798 C1QL3Q5VWW1 255 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 CCL17Q92583 94 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 TRAV13-2A0A0B4J235 113 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 SLC25A48Q6ZT89 311 aaKnown RBP7.79□□□□□ -1.16
COL12A1-211ENST00000615798 ANAPC1Q9H1A4 1944 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 C21orf140B9A014 251 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 H3BQ85 93 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 FHL5Q5TD97 284 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 H3BMG7 143 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 CT62P0C5K7 136 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 ZNF32P17041 273 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 TMEM158Q8WZ71 300 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 DEFB127Q9H1M4 99 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 IGKV1D-42A0A075B6H8 117 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 LCN12Q6JVE5 192 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 CBLN3Q6UW01 205 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 PRSS41Q7RTY9 318 aa7.79□□□□□ -1.16
COL12A1-211ENST00000615798 CXCL13O43927 109 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms