RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 SERF1AO75920 110 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 RPL23P62829 140 aaKnown RBP15.4■□□□□ 0.06
GABPB1-212ENST00000615671 TRAV3A0A0B4J244 114 aa15.4■□□□□ 0.06
GABPB1-212ENST00000615671 DMRTC2Q8IXT2 367 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-212ENST00000615671 IGLV3-12A0A075B6K2 115 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 EFNB3Q15768 340 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 TIMP3P35625 211 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 Q5PR19 223 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 LINC00205P59089 165 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 Q6AWC8 147 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 C20orf204Q6ZNR8 217 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 GGNQ86UU5 652 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 TMEM86BQ8N661 226 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 TCRAP04437 139 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 CCL1P22362 96 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 MRAPQ8TCY5 172 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 IGKV1D-8A0A087WSZ0 117 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 SYNJ2BPP57105 145 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 FLVCR1-AS1Q8TAF5 88 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 RALGAPA1Q6GYQ0 2036 aa15.39■□□□□ 0.05
GABPB1-212ENST00000615671 SBF2Q86WG5 1849 aa15.38■□□□□ 0.05
GABPB1-212ENST00000615671 IGFBP3P17936 291 aaPredicted RBP15.38■□□□□ 0.05
GABPB1-212ENST00000615671 OR2K2Q8NGT1 345 aa15.38■□□□□ 0.05
GABPB1-212ENST00000615671 PSG1P11464 419 aa15.38■□□□□ 0.05
GABPB1-212ENST00000615671 DPM2O94777 84 aa15.38■□□□□ 0.05
GABPB1-212ENST00000615671 CGB3P0DN86 165 aa15.38■□□□□ 0.05
GABPB1-212ENST00000615671 SRSF3P84103 164 aaKnown RBP15.38■□□□□ 0.05
GABPB1-212ENST00000615671 SLC25A2Q9BXI2 301 aa15.38■□□□□ 0.05
GABPB1-212ENST00000615671 A0A087WWL8 130 aa15.37■□□□□ 0.05
GABPB1-212ENST00000615671 LINC00477Q96M19 166 aa15.37■□□□□ 0.05
GABPB1-212ENST00000615671 PLSCR4Q9NRQ2 329 aa15.37■□□□□ 0.05
GABPB1-212ENST00000615671 LURAP1LQ8IV03 231 aa15.37■□□□□ 0.05
GABPB1-212ENST00000615671 A0A1B0GW15 77 aa15.37■□□□□ 0.05
GABPB1-212ENST00000615671 TEX38Q6PEX7 206 aa15.37■□□□□ 0.05
GABPB1-212ENST00000615671 IGKCP01834 107 aa15.36■□□□□ 0.05
GABPB1-212ENST00000615671 C1orf159Q96HA4 380 aa15.36■□□□□ 0.05
GABPB1-212ENST00000615671 ZNF625Q96I27 306 aaPredicted RBP15.36■□□□□ 0.05
GABPB1-212ENST00000615671 LAMTOR3Q9UHA4 124 aa15.36■□□□□ 0.05
GABPB1-212ENST00000615671 TRAV13-1A0A0B4J241 112 aa15.36■□□□□ 0.05
GABPB1-212ENST00000615671 ERCC8Q13216 396 aa15.35■□□□□ 0.05
GABPB1-212ENST00000615671 GGTLC3B5MD39 225 aa15.35■□□□□ 0.05
GABPB1-212ENST00000615671 HOXA3O43365 443 aaPredicted RBP15.35■□□□□ 0.05
GABPB1-212ENST00000615671 NRN1Q9NPD7 142 aa15.35■□□□□ 0.05
GABPB1-212ENST00000615671 EFNA2O43921 213 aa15.35■□□□□ 0.05
GABPB1-212ENST00000615671 OCC1Q8TAD7 63 aa15.35■□□□□ 0.05
GABPB1-212ENST00000615671 WFDC1Q9HC57 220 aa15.35■□□□□ 0.05
GABPB1-212ENST00000615671 ZNRD1Q9P1U0 126 aa15.35■□□□□ 0.05
GABPB1-212ENST00000615671 IGKV1-12A0A0C4DH73 117 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 IGKV1D-12P01611 117 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 LINC00271P0C7V0 271 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 MSRB2Q9Y3D2 182 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 IGHV3-16A0A0C4DH30 117 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 MST1P26927 711 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 SAA4P35542 130 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 CCL20P78556 96 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 BUB1B-PAK6H3BSN5 160 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 M0R2P5 195 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 RPL36AP83881 106 aaKnown RBP15.34■□□□□ 0.05
GABPB1-212ENST00000615671 NIT1Q86X76 327 aa15.34■□□□□ 0.05
GABPB1-212ENST00000615671 RPL36ALQ969Q0 106 aaKnown RBP15.34■□□□□ 0.05
GABPB1-212ENST00000615671 PSPNO60542 156 aa15.33■□□□□ 0.05
GABPB1-212ENST00000615671 F5H768 121 aa15.33■□□□□ 0.05
GABPB1-212ENST00000615671 SEC16AO15027 2179 aa15.33■□□□□ 0.04
GABPB1-212ENST00000615671 GAFA1Q96PS6 74 aa15.33■□□□□ 0.04
GABPB1-212ENST00000615671 SCN5AQ14524 2016 aa15.33■□□□□ 0.04
GABPB1-212ENST00000615671 KNCNA6PVL3 124 aa15.33■□□□□ 0.04
GABPB1-212ENST00000615671 IFITM2Q01629 132 aa15.33■□□□□ 0.04
GABPB1-212ENST00000615671 TOMM40O96008 361 aa15.33■□□□□ 0.04
GABPB1-212ENST00000615671 NAPSAO96009 420 aa15.33■□□□□ 0.04
GABPB1-212ENST00000615671 RNF114Q9Y508 228 aa15.33■□□□□ 0.04
GABPB1-212ENST00000615671 F8VVB4 439 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 F8VWA3 439 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 IL18BPO95998 194 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 LAGE3Q14657 143 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 IGKV1-27A0A075B6S5 117 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 D6R8Y8 96 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 ORMDL2Q53FV1 153 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 RNF222A6NCQ9 220 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 XCL2Q9UBD3 114 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 ARID2Q68CP9 1835 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 TRAV8-4A0A0B4J246 113 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 PLNP26678 52 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 HIST1H4AP62805 103 aaKnown RBP15.32■□□□□ 0.04
GABPB1-212ENST00000615671 C14orf178Q8N769 122 aaPredicted RBP15.32■□□□□ 0.04
GABPB1-212ENST00000615671 DERL1Q9BUN8 251 aa15.32■□□□□ 0.04
GABPB1-212ENST00000615671 C5orf63A6NC05 138 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 C6orf226Q5I0X4 101 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 SPSB3Q6PJ21 355 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 LYZL1Q6UWQ5 148 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 ATP5L2Q7Z4Y8 100 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 RNF126Q9BV68 326 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 TET1Q8NFU7 2136 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 TRBV7-1A0A0A6YYK4 115 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 CGB7P0DN87 165 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 DEFB131AP59861 70 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 SH2D1AO60880 128 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 RNF166Q96A37 237 aaPredicted RBP15.31■□□□□ 0.04
GABPB1-212ENST00000615671 SCN10AQ9Y5Y9 1956 aa15.31■□□□□ 0.04
GABPB1-212ENST00000615671 MBD3L4A6NDZ8 208 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-212ENST00000615671 MBD3L3A6NE82 208 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms