RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 RABAC1Q9UI14 185 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 FAM24AA6NFZ4 105 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 H3BTX0 84 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 H2AFB2P0C5Z0 115 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 ZNF705DP0CH99 300 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-208ENST00000614678 ZNF705BP0CI00 300 aaPredicted RBP4.2□□□□□ -1.74
CPNE3-208ENST00000614678 NPBWR1P48145 328 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 DEFB131AP59861 70 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 TMEM217Q8N7C4 229 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 SCGB3A2Q96PL1 93 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 GPR61Q9BZJ8 451 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 MAP6D1Q9H9H5 199 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 ZFP92A6NM28 416 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 TSPAN4O14817 238 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 PFDN1O60925 122 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 IGKV3-20P01619 116 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 HNRNPCP07910 306 aaKnown RBP eCLIP4.2□□□□□ -1.74
CPNE3-208ENST00000614678 HLA-DMBP28068 263 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 H2BFSP57053 126 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 LYZP61626 148 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 ZNF600Q6ZNG1 722 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 VSIRQ9H7M9 311 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 EDA2RQ9HAV5 297 aa4.2□□□□□ -1.74
CPNE3-208ENST00000614678 SMCO3A2RU48 225 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 H0YIZ8 118 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 GIG44P09565 113 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-208ENST00000614678 NKX2-1P43699 371 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-208ENST00000614678 P2RY1P47900 373 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 FXYD7P58549 80 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 SLC38A11Q08AI6 406 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 RAB32Q13637 225 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 DCANP1Q8TF63 244 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 PSENENQ9NZ42 101 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 TMED3Q9Y3Q3 217 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 NAP1L6A6NFF2 107 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 ATG12O94817 140 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 RD3LP0DJH9 198 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 CRYBB3P26998 211 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 ASAH1Q13510 395 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 OVOL2Q9BRP0 275 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 SLC25A22Q9H936 323 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 PFDN2Q9UHV9 154 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 U3KQ87 197 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
CPNE3-208ENST00000614678 C5orf51A6NDU8 294 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 B3GALNT1O75752 331 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 ORM2P19652 201 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 SUB1P53999 127 aaKnown RBP eCLIP4.19□□□□□ -1.747e-8■■■■■ 65.2
CPNE3-208ENST00000614678 RELQ04864 619 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-208ENST00000614678 ZNF431Q8TF32 576 aaPredicted RBP4.19□□□□□ -1.74
CPNE3-208ENST00000614678 C20orf173Q96LM9 149 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 CCDC32Q9BV29 185 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 SCRT1Q9BWW7 348 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 C11orf1Q9H5F2 150 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 TECRQ9NZ01 308 aaKnown RBP4.19□□□□□ -1.74
CPNE3-208ENST00000614678 OR5AC2Q9NZP5 309 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 IGSF23A1L1A6 192 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 CENPXA8MT69 81 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 K7EPK0 472 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 GOSR2O14653 212 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 BUB3O43684 328 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 CXCL3P19876 107 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 NPPCP23582 126 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 S100A10P60903 97 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 IL15RAQ13261 267 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 Q5BKY6 102 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 GCSAMLQ5JQS6 135 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 GLMPQ8WWB7 406 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 TXN2Q99757 166 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 U3KQE9 123 aa4.19□□□□□ -1.74
CPNE3-208ENST00000614678 K7EMT4 169 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 RGS13O14921 159 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 BCAP31P51572 246 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 NHLH2Q02577 135 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 DCTN2Q13561 401 aaKnown RBP4.18□□□□□ -1.74
CPNE3-208ENST00000614678 PATE2Q6UY27 113 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 C12orf45Q8N5I9 185 aaPredicted RBP4.18□□□□□ -1.74
CPNE3-208ENST00000614678 RNF182Q8N6D2 247 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 RNASEH2CQ8TDP1 164 aaKnown RBP4.18□□□□□ -1.74
CPNE3-208ENST00000614678 RNF125Q96EQ8 232 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 PALMDQ9NP74 551 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 C4BPBP20851 252 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 COQ8AQ8NI60 647 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 WWC2-AS2Q96NR7 200 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 DNAH1Q9P2D7 4330 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 ZNF846Q147U1 533 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 NDUFA5Q16718 116 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 PSMG4Q5JS54 123 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 ACTL10Q5JWF8 245 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 CASC10Q5T4H9 136 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 TMEM14EPQ6UXP3 125 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 THAP6Q8TBB0 222 aa4.18□□□□□ -1.74
CPNE3-208ENST00000614678 SPAG8Q99932 426 aaPredicted RBP4.18□□□□□ -1.74
CPNE3-208ENST00000614678 TRAV5A0A0B4J249 113 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 A0A0J9YWU9 116 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 A8MZ25 164 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 CYB5BO43169 146 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 TOMM40O96008 361 aa4.17□□□□□ -1.74
CPNE3-208ENST00000614678 SRPXP78539 464 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms