RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 DPM3Q9P2X0 92 aa5.71□□□□□ -1.5
CLCN3-211ENST00000613795 PEMTQ9UBM1 199 aa5.71□□□□□ -1.5
CLCN3-211ENST00000613795 NPFFO15130 113 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 ATP5J2P56134 94 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 PSG8Q9UQ74 426 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 MCM3APO60318 1980 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 GGTLC3B5MD39 225 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 CNTFRP26992 372 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 GAGE2AQ6NT46 116 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 BRCA1P38398 1863 aaKnown RBP5.7□□□□□ -1.5
CLCN3-211ENST00000613795 IGKV1D-8A0A087WSZ0 117 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 SAA2-SAA4A0A096LPE2 208 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 IGKV1-9A0A0C4DH69 117 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 FAM159AQ6UWV7 190 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 SCN10AQ9Y5Y9 1956 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 C9JAW5 83 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 CDPF1Q6NVV7 123 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 CCDC88CQ9P219 2028 aa5.7□□□□□ -1.5
CLCN3-211ENST00000613795 B5MCH6 92 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 D6R8Y8 96 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 UPK2O00526 184 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 IFI27P40305 119 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-211ENST00000613795 ANKRD39Q53RE8 183 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 CD69Q07108 199 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 LGALS9BQ3B8N2 356 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 LGALS9CQ6DKI2 356 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 ZIC4Q8N9L1 334 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 VGLL1Q99990 258 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 FNDC10F2Z333 226 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 QRFPP83859 136 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 RPL39P5Q59GN2 51 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 PVRIGQ6DKI7 326 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 SRSF8Q9BRL6 282 aaKnown RBP5.69□□□□□ -1.5
CLCN3-211ENST00000613795 TRAV12-3A0A0B4J271 114 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 HGFACQ04756 655 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 MORN2Q502X0 79 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 Q6ZS49 121 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 ANKRD36A6QL64 1941 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 INAFM2P0DMQ5 153 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 MYOD1P15172 320 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 UTF1Q5T230 341 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 ZC2HC1BQ5TFG8 222 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 ABHD17AQ96GS6 310 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 SLC50A1Q9BRV3 221 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 DCTN5Q9BTE1 182 aa5.69□□□□□ -1.5
CLCN3-211ENST00000613795 SIPA1L1O43166 1804 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 PRCDQ00LT1 54 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 ZNF497Q6ZNH5 498 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 TMEM74BQ9NUR3 256 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 ANAPC10Q9UM13 185 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 IGKV1D-43A0A0B4J1Z2 117 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 M0R381 172 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 EVI2AP22794 236 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 ZNF826PQ6ZT77 177 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 SMIM20Q8N5G0 67 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 RNF5Q99942 180 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 ZNF319Q9P2F9 582 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 RFNGQ9Y644 331 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 A0A087WV48 116 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 MESP2Q0VG99 397 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 CENPVQ7Z7K6 275 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-211ENST00000613795 FDCSPQ8NFU4 85 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 PYGO2Q9BRQ0 406 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 MBNL3Q9NUK0 354 aaKnown RBP5.68□□□□□ -1.5
CLCN3-211ENST00000613795 ZNF492Q9P255 531 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 SELENOKQ9Y6D0 94 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 TRAV21A0A0B4J279 112 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 CGB1A6NKQ9 187 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 OOSP1A8MZH6 123 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 ZFP36L1Q07352 338 aaKnown RBP5.68□□□□□ -1.5
CLCN3-211ENST00000613795 RSPO4Q2I0M5 234 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-211ENST00000613795 TNFRSF18Q9Y5U5 241 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 A0A1B0GUS0 222 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 CECR9P0C854 216 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 PYYP10082 97 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 GATA2P23769 480 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-211ENST00000613795 HIST1H4AP62805 103 aaKnown RBP5.68□□□□□ -1.5
CLCN3-211ENST00000613795 VOPP1Q96AW1 172 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 LIME1Q9H400 295 aa5.68□□□□□ -1.5
CLCN3-211ENST00000613795 C17orf100A8MU93 164 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 DUSP14O95147 198 aaKnown RBP5.67□□□□□ -1.5
CLCN3-211ENST00000613795 IGKV3D-15A0A087WSY6 115 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 E9PLN8 166 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 TOMM40O96008 361 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 FAM74A4Q5TZK3 123 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 NEGR1Q7Z3B1 354 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 CEND1Q8N111 149 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 C8orf46Q8TAG6 207 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 LYZL4Q96KX0 146 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 TRBV6-6A0A0A6YYG2 114 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 NTN3O00634 580 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-211ENST00000613795 RPL15P61313 204 aaKnown RBP5.67□□□□□ -1.5
CLCN3-211ENST00000613795 UNQ6494/PRO21346Q6UXR6 183 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 BMPERQ8N8U9 685 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 FAM168AQ92567 244 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 FBXL15Q9H469 300 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 FOXA2Q9Y261 457 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-211ENST00000613795 G3V4G9 280 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 J3KT08 172 aa5.67□□□□□ -1.5
CLCN3-211ENST00000613795 HTN1P15515 57 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms