RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 KCNIP2Q9NS61 270 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 SMCO3A2RU48 225 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 M0QZ24 198 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 EIF3GO75821 320 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMAD4-217ENST00000611848 CD28P10747 220 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 CX3CL1P78423 397 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 C2orf83Q53S99 150 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 FAM24BQ8N5W8 94 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 C11orf44Q8N8P7 122 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 VSTM2AQ8TAG5 236 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 TMEM167AQ8TBQ9 72 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 SDF2L1Q9HCN8 221 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 NDUFA4L2Q9NRX3 87 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 TMEM242Q9NWH2 141 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 LINC00527Q9UJ94 153 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 PXMP4Q9Y6I8 212 aa6.91□□□□□ -1.3
SMAD4-217ENST00000611848 FCN1O00602 326 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 ATP6V0E1O15342 81 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 HMGB3O15347 200 aaKnown RBP6.9□□□□□ -1.3
SMAD4-217ENST00000611848 OPN1MWP04001 364 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 OPN1MW2P0DN77 364 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 OPN1MW3P0DN78 364 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 RPL29P47914 159 aaKnown RBP6.9□□□□□ -1.3
SMAD4-217ENST00000611848 CRIP2P52943 208 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-217ENST00000611848 RAB5BP61020 215 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 GCSAMLQ5JQS6 135 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 TEX38Q6PEX7 206 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 TEPPQ6URK8 271 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 ZNF329Q86UD4 541 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 NDUFA11Q86Y39 141 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 C1QL4Q86Z23 238 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 OR1L8Q8NGR8 309 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 BIN3Q9NQY0 253 aa6.9□□□□□ -1.3
SMAD4-217ENST00000611848 MGAM2Q2M2H8 2515 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 A0A1W2PPV4 95 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 ZNF727A8MUV8 499 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 C1orf196B1AJZ1 125 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 LCE2BO14633 110 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 ELANEP08246 267 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 STAG3L2P0CL84 134 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 STAG3L3P0CL85 134 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 RNASE2P10153 161 aaKnown RBP6.9□□□□□ -1.31
SMAD4-217ENST00000611848 RPL8P62917 257 aaKnown RBP6.9□□□□□ -1.31
SMAD4-217ENST00000611848 PRR20EP86478 221 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 PRR20CP86479 221 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 PRR20DP86480 221 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 PRR20BP86481 221 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 PRR20AP86496 221 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 NDPQ00604 133 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 RAB31Q13636 194 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 FXYD3Q14802 87 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 MIC13Q5XKP0 118 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 CYP2G1PQ6ZSU1 146 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 MMD2Q8IY49 270 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 ABHD5Q8WTS1 349 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 GATAD1Q8WUU5 269 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 ARPC1AQ92747 370 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 TMEM68Q96MH6 324 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 CITED2Q99967 270 aaPredicted RBP6.9□□□□□ -1.31
SMAD4-217ENST00000611848 HINT2Q9BX68 163 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 TPSG1Q9NRR2 321 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 NAT8Q9UHE5 227 aa6.9□□□□□ -1.31
SMAD4-217ENST00000611848 TSSC4Q9Y5U2 329 aaPredicted RBP6.9□□□□□ -1.31
SMAD4-217ENST00000611848 TRAV41A0A0B4J266 112 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 TCRBV4S1A1TA0A5B7 111 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 PAGE4O60829 102 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 ACTL6BO94805 426 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 CNIH1O95406 144 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 DEFA4P12838 97 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 PPIFP30405 207 aaKnown RBP6.89□□□□□ -1.31
SMAD4-217ENST00000611848 RND2P52198 227 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 CFHR3Q02985 330 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 FOXE3Q13461 319 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 ELOBQ15370 118 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 PRSS8Q16651 343 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 TMEM241Q24JQ0 296 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 TCTEX1D4Q5JR98 221 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 PRR31Q5SQ13 230 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 C10orf99Q6UWK7 81 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 TMEM144Q7Z5S9 345 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 SMIM7Q9BQ49 75 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 COMMD5Q9GZQ3 224 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 CTDSP1Q9GZU7 261 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 SAV1Q9H4B6 383 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-217ENST00000611848 SLC45A2Q9UMX9 530 aa6.89□□□□□ -1.31
SMAD4-217ENST00000611848 NOTCH3Q9UM47 2321 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 A0A1W2PN81 502 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 CGB1A6NKQ9 187 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 G3V318 75 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 PDE6DO43924 150 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 CXorf1O96002 111 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 IGHG4P01861 327 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 LINC00869P0C866 280 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 CHRNA7P36544 502 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 GPX4P36969 197 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-217ENST00000611848 B2MP61769 119 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 GNB1P62873 340 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 ERHP84090 104 aaKnown RBP6.88□□□□□ -1.31
SMAD4-217ENST00000611848 ECSCRQ19T08 205 aa6.88□□□□□ -1.31
SMAD4-217ENST00000611848 MRGPRG-AS1Q2M3A8 158 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms