RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 LHFPL4Q7Z7J7 247 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 NIT1Q86X76 327 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 C8orf46Q8TAG6 207 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 DPF1Q92782 380 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 TNFRSF14Q92956 283 aa10.18□□□□□ -0.78
CDH1-212ENST00000611625 IGHV3-49A0A0A0MS15 119 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 ITGB1BP1O14713 200 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 CIDEAO60543 219 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 GPR183P32249 361 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 DLX1P56177 255 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 DGAT2L7PQ6IED9 249 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 FER1L6-AS1Q8NA97 138 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 ABCA4P78363 2273 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 MLANAQ16655 118 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 KLK15Q9H2R5 256 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 GOLGB1Q14789 3259 aaKnown RBP10.17□□□□□ -0.78
CDH1-212ENST00000611625 ZNF124Q15973 351 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 PLP1P60201 277 aa10.17□□□□□ -0.78
CDH1-212ENST00000611625 TYMSP04818 313 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 ZNF474Q6S9Z5 364 aaPredicted RBP10.16□□□□□ -0.78
CDH1-212ENST00000611625 RASL11AQ6T310 242 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 FAM169BQ8N8A8 192 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 A0A1B0GUS0 222 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 A6NNC1 897 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 TMEM178BH3BS89 294 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 TIMM23O14925 209 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 CD24P25063 80 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 YLPM1P49750 1951 aaKnown RBP10.16□□□□□ -0.78
CDH1-212ENST00000611625 IGHV1-8P0DP01 117 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 RPL13AP40429 203 aaKnown RBP10.16□□□□□ -0.78
CDH1-212ENST00000611625 VDAC2P45880 294 aaPredicted RBP10.16□□□□□ -0.78
CDH1-212ENST00000611625 HIST1H4GQ99525 98 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 IGHV3-66A0A0C4DH42 116 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 A8MWP6 167 aa10.16□□□□□ -0.78
CDH1-212ENST00000611625 FGF23Q9GZV9 251 aaPredicted RBP10.16□□□□□ -0.78
CDH1-212ENST00000611625 TMEM238LA0A1B0GVL6 79 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 A6NJY4 79 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 C3orf79P0CE67 100 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 CLEC2AQ6UVW9 174 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 NEU4Q8WWR8 484 aaPredicted RBP10.15□□□□□ -0.78
CDH1-212ENST00000611625 CHCHD1Q96BP2 118 aaKnown RBP10.15□□□□□ -0.78
CDH1-212ENST00000611625 TRGV9Q99603 122 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 GPX1P07203 203 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 PSG1P11464 419 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 TMEM14BQ9NUH8 114 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 IGHV2-26A0A0B4J1V2 119 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 TCRAP04437 139 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 NUP35Q8NFH5 326 aa10.15□□□□□ -0.78
CDH1-212ENST00000611625 M0R3E3 92 aa10.15□□□□□ -0.79
CDH1-212ENST00000611625 WNT2P09544 360 aa10.15□□□□□ -0.79
CDH1-212ENST00000611625 OR1N2Q8NGR9 330 aa10.15□□□□□ -0.79
CDH1-212ENST00000611625 SCRT1Q9BWW7 348 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 DCAF16Q9NXF7 216 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 TTC28Q96AY4 2481 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 USF3Q68DE3 2245 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 PRR31Q5SQ13 230 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 LCN12Q6JVE5 192 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 OR5AN1Q8NGI8 311 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 TMEM160Q9NX00 188 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 FAM181BA6NEQ2 426 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 FREM1Q5H8C1 2179 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 EXOC3-AS1Q8N2X6 119 aa10.14□□□□□ -0.79
CDH1-212ENST00000611625 EREGO14944 169 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 SFTPCP11686 197 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 ERASQ7Z444 233 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 LINC00479Q96M42 142 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 MED13LQ71F56 2210 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 GTF3C1Q12789 2109 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 CREBBPQ92793 2442 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 PMS2P5A8MQ11 134 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 LY6EQ16553 131 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 EBLN2Q6P2I7 272 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 ZNRD1Q9P1U0 126 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 TRAV8-6A0A0B4J262 113 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 HIST1H1AQ02539 215 aaPredicted RBP10.13□□□□□ -0.79
CDH1-212ENST00000611625 KLRB1Q12918 225 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 KRTAP27-1Q3LI81 207 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 NUP37Q8NFH4 326 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 SLC25A39Q9BZJ4 359 aaPredicted RBP10.13□□□□□ -0.79
CDH1-212ENST00000611625 MRPL27Q9P0M9 148 aaKnown RBP10.13□□□□□ -0.79
CDH1-212ENST00000611625 IGHV3OR16-10A0A075B7F0 116 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 FABP5P3A8MUU1 101 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 OR11H12B2RN74 326 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 C15orf65H3BRN8 121 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 ZNF114Q8NC26 417 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 OR11H1Q8NG94 326 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 OR11H2Q8NH07 326 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
CDH1-212ENST00000611625 POLR3KQ9Y2Y1 108 aaPredicted RBP10.13□□□□□ -0.79
CDH1-212ENST00000611625 PCNX2A6NKB5 2137 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 IGHV1-3A0A0C4DH29 117 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 ATP5LO75964 103 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 TRGV3P03979 118 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 Q0VG73 95 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 LOC107984156A0A0G2JMH3 177 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 ARL17AQ8IVW1 177 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 FOXC2Q99958 501 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 A0A1B0GWJ7 208 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 M0R381 172 aa10.12□□□□□ -0.79
CDH1-212ENST00000611625 DLEU1O43261 78 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms