RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	MRPL20	Q9BYC9	149 aa	Known RBP	13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	ZNF492	Q9P255	531 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	MUC21	A0A0G2JKD1	596 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	MUC21	A0A140T8X8	626 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	OR2T8	A6NH00	312 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	PRR33	A8MZF0	331 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	OR5AL1	P0C617	328 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	WT1-AS	Q06250	92 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	MUC21	Q5SSG8	566 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	STXBP6	Q8NFX7	210 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	CST9L	Q9H4G1	147 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	RNF7	Q9UBF6	113 aa		13.37	□□□□□ -0.27
CAPN12-211	ENST00000601685	IGHV3-48	P01763	117 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	APOA2	P02652	100 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	LIPF	P07098	398 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	GATA4	P43694	442 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	PET117	Q6UWS5	81 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	DEFB108B	Q8NET1	73 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	BLNK	Q8WV28	456 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	CCL13	Q99616	98 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	MRPL36	Q9P0J6	103 aa	Known RBP	13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	CGB1	A6NKQ9	187 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685		P01737	135 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	HLA-DRB1	P01911	266 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	PSG1	P11464	419 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	PERP	Q96FX8	193 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	NDFIP1	Q9BT67	221 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	GFRA4	Q9GZZ7	299 aa		13.36	□□□□□ -0.27
CAPN12-211	ENST00000601685	TMEM177	Q53S58	311 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	FAM216B	Q8N7L0	139 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	MAP1LC3C	Q9BXW4	147 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	RPH3AL	Q9UNE2	315 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	ZNF835	Q9Y2P0	537 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	LTA	P01374	205 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	SUB1	P53999	127 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	OCIAD2	Q56VL3	154 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	LDLRAD2	Q5SZI1	272 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	ZNF788	Q6ZQV5	615 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	TMEM167A	Q8TBQ9	72 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	FMC1	Q96HJ9	113 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	MS4A6A	Q9H2W1	248 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	PROCR	Q9UNN8	238 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	RNF24	Q9Y225	148 aa		13.35	□□□□□ -0.27
CAPN12-211	ENST00000601685	CBY3	A6NI87	242 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	TOX4	O94842	621 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	ETFRF1	Q6IPR1	90 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	VHLL	Q6RSH7	139 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	BOD1L1	Q8NFC6	3051 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	ICE1	Q9Y2F5	2266 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	CD5L	O43866	347 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	NBEAP1	P0C6P0	100 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	GLRX	P35754	106 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	ZNF137P	P52743	207 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	C10orf55	Q5SWW7	151 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	AMMECR1L	Q6DCA0	310 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	OR5AN1	Q8NGI8	311 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	OR4A5	Q8NH83	315 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	SARAF	Q96BY9	339 aa		13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685	FLYWCH2	Q96CP2	140 aa	Known RBP	13.34	□□□□□ -0.27
CAPN12-211	ENST00000601685		M0R1B8	84 aa		13.33	□□□□□ -0.27
CAPN12-211	ENST00000601685	ORM2	P19652	201 aa		13.33	□□□□□ -0.27
CAPN12-211	ENST00000601685	C5orf17	Q8NAS9	161 aa		13.33	□□□□□ -0.27
CAPN12-211	ENST00000601685	CHEK1	O14757	476 aa		13.33	□□□□□ -0.28
CAPN12-211	ENST00000601685	HIST1H1A	Q02539	215 aa	Predicted RBP	13.33	□□□□□ -0.28
CAPN12-211	ENST00000601685	H1FX	Q92522	213 aa	Known RBP	13.33	□□□□□ -0.28
CAPN12-211	ENST00000601685	DAZAP1	Q96EP5	407 aa	Known RBP	13.33	□□□□□ -0.28
CAPN12-211	ENST00000601685	SSUH2	Q9Y2M2	353 aa		13.33	□□□□□ -0.28
CAPN12-211	ENST00000601685	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.33	□□□□□ -0.28
CAPN12-211	ENST00000601685	IGLV3-9	A0A075B6K5	115 aa		13.32	□□□□□ -0.28
CAPN12-211	ENST00000601685	hADV38S2	A0JD32	116 aa		13.32	□□□□□ -0.28
CAPN12-211	ENST00000601685	FAM231B	A6NCW3	169 aa		13.32	□□□□□ -0.28
CAPN12-211	ENST00000601685	OR1B1	Q8NGR6	318 aa		13.32	□□□□□ -0.28
CAPN12-211	ENST00000601685	HSPB8	Q9UJY1	196 aa		13.32	□□□□□ -0.28
CAPN12-211	ENST00000601685	TCRA	P04437	139 aa		13.32	□□□□□ -0.28
CAPN12-211	ENST00000601685	VSTM2A	Q8TAG5	236 aa		13.32	□□□□□ -0.28
CAPN12-211	ENST00000601685	MCRIP2	Q9BUT9	160 aa	Known RBP	13.32	□□□□□ -0.28
CAPN12-211	ENST00000601685	LINC00312	Q9Y6C7	94 aa		13.32	□□□□□ -0.28
CAPN12-211	ENST00000601685	C22orf46	C9J442	243 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	NPIPB6	E9PJ23	425 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685		M0R296	226 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	ZNF138	P52744	262 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	TNFAIP6	P98066	277 aa	Predicted RBP	13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	PSG9	Q00887	426 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	LHFPL4	Q7Z7J7	247 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	VPS25	Q9BRG1	176 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685		A0A087X0K7	114 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	HAX1	O00165	279 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	LINC01545	Q5VT33	79 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	TMUB1	Q9BVT8	246 aa		13.31	□□□□□ -0.28
CAPN12-211	ENST00000601685	TRAV17	A0A0B4J275	112 aa		13.3	□□□□□ -0.28
CAPN12-211	ENST00000601685	APOH	P02749	345 aa	Predicted RBP	13.3	□□□□□ -0.28
CAPN12-211	ENST00000601685	OR4C13	Q8NGP0	309 aa		13.3	□□□□□ -0.28
CAPN12-211	ENST00000601685	IGHV1-46	P01743	117 aa		13.3	□□□□□ -0.28
CAPN12-211	ENST00000601685	GP9	P14770	177 aa		13.3	□□□□□ -0.28
CAPN12-211	ENST00000601685	WT1	P19544	449 aa	Predicted RBP	13.3	□□□□□ -0.28
CAPN12-211	ENST00000601685	GPR183	P32249	361 aa		13.3	□□□□□ -0.28
CAPN12-211	ENST00000601685	SMIM15	Q7Z3B0	74 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms