RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 ZNF90Q03938 601 aa13.64□□□□□ -0.23
ZNF558-204ENST00000596172 ACOT7LQ6ZUV0 252 aa13.64□□□□□ -0.23
ZNF558-204ENST00000596172 TCF24Q7RTU0 167 aa13.64□□□□□ -0.23
ZNF558-204ENST00000596172 TMEM144Q7Z5S9 345 aa13.64□□□□□ -0.23
ZNF558-204ENST00000596172 SBSPONQ8IVN8 264 aa13.64□□□□□ -0.23
ZNF558-204ENST00000596172 OR10P1Q8NGE3 313 aa13.64□□□□□ -0.23
ZNF558-204ENST00000596172 L7N2F9 121 aa13.63□□□□□ -0.23
ZNF558-204ENST00000596172 DFFBO76075 338 aa13.63□□□□□ -0.23
ZNF558-204ENST00000596172 CFDP00746 253 aaPredicted RBP13.63□□□□□ -0.23
ZNF558-204ENST00000596172 HNRNPCP07910 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
ZNF558-204ENST00000596172 METTL15P1P0C7V9 234 aa13.63□□□□□ -0.23
ZNF558-204ENST00000596172 VAMP2P63027 116 aa13.63□□□□□ -0.23
ZNF558-204ENST00000596172 PAFAH1B2P68402 229 aa13.63□□□□□ -0.23
ZNF558-204ENST00000596172 DLK1P80370 383 aa13.63□□□□□ -0.23
ZNF558-204ENST00000596172 USF2Q15853 346 aaPredicted RBP13.63□□□□□ -0.23
ZNF558-204ENST00000596172 OR8G2PQ6IF36 304 aa13.63□□□□□ -0.23
ZNF558-204ENST00000596172 LINC00322Q6ZN03 302 aaPredicted RBP13.63□□□□□ -0.23
ZNF558-204ENST00000596172 GRAMD2BQ96HH9 432 aa13.63□□□□□ -0.23
ZNF558-204ENST00000596172 GGACTQ9BVM4 153 aa13.63□□□□□ -0.23
ZNF558-204ENST00000596172 LSM5Q9Y4Y9 91 aaKnown RBP13.63□□□□□ -0.23
ZNF558-204ENST00000596172 TRAV2A0A0B4J234 112 aa13.62□□□□□ -0.23
ZNF558-204ENST00000596172 PVALBP20472 110 aaPredicted RBP13.62□□□□□ -0.23
ZNF558-204ENST00000596172 CMC4P56277 68 aaPredicted RBP13.62□□□□□ -0.23
ZNF558-204ENST00000596172 CYCSP99999 105 aaKnown RBP13.62□□□□□ -0.23
ZNF558-204ENST00000596172 DEFB125Q8N687 156 aa13.62□□□□□ -0.23
ZNF558-204ENST00000596172 RNF125Q96EQ8 232 aa13.62□□□□□ -0.23
ZNF558-204ENST00000596172 ASCL2Q99929 193 aa13.62□□□□□ -0.23
ZNF558-204ENST00000596172 NMES1Q9C002 83 aa13.62□□□□□ -0.23
ZNF558-204ENST00000596172 PFDN2Q9UHV9 154 aa13.62□□□□□ -0.23
ZNF558-204ENST00000596172 RABAC1Q9UI14 185 aa13.62□□□□□ -0.23
ZNF558-204ENST00000596172 IGHV3-66A0A0C4DH42 116 aa13.61□□□□□ -0.23
ZNF558-204ENST00000596172 GOSR2O14653 212 aa13.61□□□□□ -0.23
ZNF558-204ENST00000596172 DEDDO75618 318 aa13.61□□□□□ -0.23
ZNF558-204ENST00000596172 CCNKO75909 580 aa13.61□□□□□ -0.23
ZNF558-204ENST00000596172 NUP62P37198 522 aaPredicted RBP13.61□□□□□ -0.23
ZNF558-204ENST00000596172 P2RY1P47900 373 aa13.61□□□□□ -0.23
ZNF558-204ENST00000596172 AKR1C1Q04828 323 aa13.61□□□□□ -0.23
ZNF558-204ENST00000596172 RAB32Q13637 225 aa13.61□□□□□ -0.23
ZNF558-204ENST00000596172 C16orf54Q6UWD8 224 aa13.61□□□□□ -0.23
ZNF558-204ENST00000596172 NPVFQ9HCQ7 196 aa13.61□□□□□ -0.23
ZNF558-204ENST00000596172 BUB3O43684 328 aa13.6□□□□□ -0.23
ZNF558-204ENST00000596172 EIF2B2P49770 351 aaKnown RBP13.6□□□□□ -0.23
ZNF558-204ENST00000596172 MS4A6AQ9H2W1 248 aa13.6□□□□□ -0.23
ZNF558-204ENST00000596172 SRD5A3Q9H8P0 318 aa13.6□□□□□ -0.23
ZNF558-204ENST00000596172 LYRM2Q9NU23 88 aaPredicted RBP13.6□□□□□ -0.23
ZNF558-204ENST00000596172 HELTA6NFD8 242 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 SSNA1O43805 119 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 SIX6O95475 246 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 BCAP31P51572 246 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 AP2S1P53680 142 aaPredicted RBP13.59□□□□□ -0.23
ZNF558-204ENST00000596172 S100A10P60903 97 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 ARL16Q0P5N6 197 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 ODF3L2Q3SX64 289 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 GLMPQ8WWB7 406 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 WFDC10AQ9H1F0 79 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 MGAT4CQ9UBM8 478 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 SLC45A2Q9UMX9 530 aa13.59□□□□□ -0.23
ZNF558-204ENST00000596172 HUWE1Q7Z6Z7 4374 aaKnown RBP13.59□□□□□ -0.23
ZNF558-204ENST00000596172 SMCO3A2RU48 225 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 RBMY1BA6NDE4 496 aaKnown RBP13.58□□□□□ -0.24
ZNF558-204ENST00000596172 RBMY1EA6NEQ0 496 aaKnown RBP13.58□□□□□ -0.24
ZNF558-204ENST00000596172 RLN2P04090 185 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 RBMY1DP0C7P1 496 aaKnown RBP13.58□□□□□ -0.24
ZNF558-204ENST00000596172 CAV2P51636 162 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 H2BFSP57053 126 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 SELENOTP62341 195 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 RPL11P62913 178 aaKnown RBP13.58□□□□□ -0.24
ZNF558-204ENST00000596172 OR2F1Q13607 317 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 HAGHQ16775 308 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 C1orf194Q5T5A4 169 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 GBGT1Q8N5D6 347 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 BPIFCQ8NFQ6 507 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 TM2D3Q9BRN9 247 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 PBDC1Q9BVG4 233 aa13.58□□□□□ -0.24
ZNF558-204ENST00000596172 IGKV3-7A0A075B6H7 116 aa13.57□□□□□ -0.24
ZNF558-204ENST00000596172 FAM24AA6NFZ4 105 aa13.57□□□□□ -0.24
ZNF558-204ENST00000596172 DNASE2O00115 360 aaPredicted RBP13.57□□□□□ -0.24
ZNF558-204ENST00000596172 LYZP61626 148 aa13.57□□□□□ -0.24
ZNF558-204ENST00000596172 RRAS2P62070 204 aaPredicted RBP13.57□□□□□ -0.24
ZNF558-204ENST00000596172 TEPPQ6URK8 271 aa13.57□□□□□ -0.24
ZNF558-204ENST00000596172 CYP2G1PQ6ZSU1 146 aa13.57□□□□□ -0.24
ZNF558-204ENST00000596172 U3KQK5 164 aa13.57□□□□□ -0.24
ZNF558-204ENST00000596172 TFPI2P48307 235 aa13.56□□□□□ -0.24
ZNF558-204ENST00000596172 SULT1A1P50225 295 aa13.56□□□□□ -0.24
ZNF558-204ENST00000596172 TMEM182Q6ZP80 229 aaPredicted RBP13.56□□□□□ -0.24
ZNF558-204ENST00000596172 TMEM252Q8N6L7 170 aa13.56□□□□□ -0.24
ZNF558-204ENST00000596172 CITED4Q96RK1 184 aa13.56□□□□□ -0.24
ZNF558-204ENST00000596172 ZMAT4Q9H898 229 aa13.56□□□□□ -0.24
ZNF558-204ENST00000596172 UBQLN2Q9UHD9 624 aa13.56□□□□□ -0.24
ZNF558-204ENST00000596172 E5RGE8 158 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 K7EQG2 157 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 CST7O76096 145 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 S100A7P31151 101 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 S100A11P31949 105 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 PLP1P60201 277 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 SLC38A11Q08AI6 406 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 STX12Q86Y82 276 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 STPG3Q8N7X2 389 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 FBXL17Q9UF56 701 aa13.55□□□□□ -0.24
ZNF558-204ENST00000596172 ALG5Q9Y673 324 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms