RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 PRSS46E5RG02 174 aa12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 DNASE2O00115 360 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 APOHP02749 345 aaPredicted RBP12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 AKR1C1Q04828 323 aa12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 OR8G2PQ6IF36 304 aa12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 TMEM14EPQ6UXP3 125 aa12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 THAP8Q8NA92 274 aa12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 OR10P1Q8NGE3 313 aa12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 FAM110AQ9BQ89 295 aa12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 RCL1Q9Y2P8 373 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 LSM5Q9Y4Y9 91 aaKnown RBP12.93□□□□□ -0.34
SHKBP1-212ENST00000596163 IGHV3-66A0A0C4DH42 116 aa12.92□□□□□ -0.34
SHKBP1-212ENST00000596163 C7orf66A4D0T2 115 aa12.92□□□□□ -0.34
SHKBP1-212ENST00000596163 HELTA6NFD8 242 aa12.92□□□□□ -0.34
SHKBP1-212ENST00000596163 DFFBO76075 338 aa12.92□□□□□ -0.34
SHKBP1-212ENST00000596163 BCAP31P51572 246 aa12.92□□□□□ -0.34
SHKBP1-212ENST00000596163 AP2S1P53680 142 aaPredicted RBP12.92□□□□□ -0.34
SHKBP1-212ENST00000596163 MGAT4CQ9UBM8 478 aa12.92□□□□□ -0.34
SHKBP1-212ENST00000596163 U3KQE9 123 aa12.92□□□□□ -0.34
SHKBP1-212ENST00000596163 U3KQK5 164 aa12.92□□□□□ -0.34
SHKBP1-212ENST00000596163 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 IGKV1D-37A0A075B6S9 117 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 TRAV2A0A0B4J234 112 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 SMCO3A2RU48 225 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 FNDC10F2Z333 226 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 K7EPK0 472 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 METTL15P1P0C7V9 234 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 S100A7P31151 101 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 P2RY1P47900 373 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 DLK1P80370 383 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 CYCSP99999 105 aaKnown RBP12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 ZNF90Q03938 601 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 ACOT7LQ6ZUV0 252 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 TMEM144Q7Z5S9 345 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 RNF125Q96EQ8 232 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 PBDC1Q9BVG4 233 aa12.91□□□□□ -0.34
SHKBP1-212ENST00000596163 PMS2P5A8MQ11 134 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 SSNA1O43805 119 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 RLN2P04090 185 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 TFPI2P48307 235 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 S100A10P60903 97 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 USF2Q15853 346 aaPredicted RBP12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 HAGHQ16775 308 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 LILRB2Q8N423 598 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 GBGT1Q8N5D6 347 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 GGACTQ9BVM4 153 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 NPVFQ9HCQ7 196 aa12.9□□□□□ -0.34
SHKBP1-212ENST00000596163 GOSR2O14653 212 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 PTTG1O95997 202 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 CAV2P51636 162 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 LYZP61626 148 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 IL15RAQ13261 267 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 OR2F1Q13607 317 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 C16orf54Q6UWD8 224 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 LINC00322Q6ZN03 302 aaPredicted RBP12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 WFDC3Q8IUB2 231 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 WFDC10AQ9H1F0 79 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 UBQLN2Q9UHD9 624 aa12.89□□□□□ -0.35
SHKBP1-212ENST00000596163 IGKV1OR2-108A0A075B7D4 117 aa12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 LOC102724200A0A096LPH7 203 aaPredicted RBP12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 BUB3O43684 328 aa12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 DEDDO75618 318 aa12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 RRAS2P62070 204 aaPredicted RBP12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 RAB32Q13637 225 aa12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 PPP1R14BQ96C90 147 aa12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 SPATA25Q9BR10 227 aa12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 TM2D3Q9BRN9 247 aa12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 NMES1Q9C002 83 aa12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 FBXL17Q9UF56 701 aa12.88□□□□□ -0.35
SHKBP1-212ENST00000596163 RBMY1BA6NDE4 496 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-212ENST00000596163 RBMY1EA6NEQ0 496 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-212ENST00000596163 RBMY1DP0C7P1 496 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-212ENST00000596163 SELENOTP62341 195 aa12.87□□□□□ -0.35
SHKBP1-212ENST00000596163 ODF3L2Q3SX64 289 aa12.87□□□□□ -0.35
SHKBP1-212ENST00000596163 S100A7AQ86SG5 101 aa12.87□□□□□ -0.35
SHKBP1-212ENST00000596163 STXBP6Q8NFX7 210 aa12.87□□□□□ -0.35
SHKBP1-212ENST00000596163 GGTLC1Q9BX51 225 aa12.87□□□□□ -0.35
SHKBP1-212ENST00000596163 SLC45A2Q9UMX9 530 aa12.87□□□□□ -0.35
SHKBP1-212ENST00000596163 CCNKO75909 580 aa12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 SIX6O95475 246 aa12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 C1orf194Q5T5A4 169 aa12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 TEPPQ6URK8 271 aa12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 CYP2G1PQ6ZSU1 146 aa12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 STX12Q86Y82 276 aa12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 GLMPQ8WWB7 406 aa12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 RCHY1Q96PM5 261 aa12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 LYRM2Q9NU23 88 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 DNAH9Q9NYC9 4486 aa12.86□□□□□ -0.35
SHKBP1-212ENST00000596163 FAM24AA6NFZ4 105 aa12.85□□□□□ -0.35
SHKBP1-212ENST00000596163 SULT1A1P50225 295 aa12.85□□□□□ -0.35
SHKBP1-212ENST00000596163 APOC4P55056 127 aa12.85□□□□□ -0.35
SHKBP1-212ENST00000596163 HBG1P69891 147 aa12.85□□□□□ -0.35
SHKBP1-212ENST00000596163 HBG2P69892 147 aa12.85□□□□□ -0.35
SHKBP1-212ENST00000596163 SIGLEC15Q6ZMC9 328 aa12.85□□□□□ -0.35
SHKBP1-212ENST00000596163 C11orf1Q9H5F2 150 aa12.85□□□□□ -0.35
SHKBP1-212ENST00000596163 E5RGE8 158 aa12.84□□□□□ -0.35
SHKBP1-212ENST00000596163 K7EQG2 157 aa12.84□□□□□ -0.35
SHKBP1-212ENST00000596163 ORM2P19652 201 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms