RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 CORTO00230 105 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 TOMM40O96008 361 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 TNFSF4P23510 183 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 CA7P43166 264 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 PRR27Q6MZM9 219 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 RNASEKQ6P5S7 137 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 WFDC8Q8IUA0 241 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 OR4C13Q8NGP0 309 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 URB1-AS1Q96HZ7 61 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 MLST8Q9BVC4 326 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 IGLL1P15814 213 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 CAMPP49913 170 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 RIPPLY3P57055 190 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 Q56UQ5 140 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 SHISA2Q6UWI4 295 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 LINC00305Q7Z4B0 112 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 OR4F17Q8NGA8 305 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 PRSS22Q9GZN4 317 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 C1RLQ9NZP8 487 aa11.97□□□□□ -0.49
SMARCA4-219ENST00000592604 SVILO95425 2214 aa11.96□□□□□ -0.49
SMARCA4-219ENST00000592604 HINT1P49773 126 aaPredicted RBP11.96□□□□□ -0.49
SMARCA4-219ENST00000592604 GNG5P63218 68 aa11.96□□□□□ -0.49
SMARCA4-219ENST00000592604 PDPNQ86YL7 162 aa11.96□□□□□ -0.49
SMARCA4-219ENST00000592604 ZCCHC24Q8N2G6 241 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-219ENST00000592604 GPR82Q96P67 336 aa11.96□□□□□ -0.49
SMARCA4-219ENST00000592604 MRPL36Q9P0J6 103 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-219ENST00000592604 PLCE1Q9P212 2302 aa11.96□□□□□ -0.49
SMARCA4-219ENST00000592604 CRXO43186 299 aaPredicted RBP11.96□□□□□ -0.5
SMARCA4-219ENST00000592604 WT1P19544 449 aaPredicted RBP11.96□□□□□ -0.5
SMARCA4-219ENST00000592604 CT83Q5H943 113 aa11.96□□□□□ -0.5
SMARCA4-219ENST00000592604 ZNF48Q96MX3 618 aaPredicted RBP11.96□□□□□ -0.5
SMARCA4-219ENST00000592604 IGLV2-23P01705 113 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 HBBP68871 147 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 LDLRAD2Q5SZI1 272 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 FAM71F2Q6NXP2 309 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 RBMXL3Q8N7X1 1067 aaKnown RBP11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 COX11Q9Y6N1 276 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 IGLC7A0M8Q6 106 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 SLC25A5P05141 298 aaKnown RBP11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 UBE2V1Q13404 147 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 FAM120AOSQ5T036 256 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 MUC15Q8N387 334 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 OR4C5Q8NGB2 326 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 PERPQ96FX8 193 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 TMEM70Q9BUB7 260 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 SOX21Q9Y651 276 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 NAV3Q8IVL0 2385 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 ARFGEF3Q5TH69 2177 aa11.95□□□□□ -0.5
SMARCA4-219ENST00000592604 IGHV1-69-2A0A0G2JMI3 117 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 C10orf55Q5SWW7 151 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 SPATA12Q7Z6I5 190 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 KIR3DL3Q8N743 410 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 RPP21Q9H633 154 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 PGPA6NDG6 321 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 MOSP00540 346 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 IGHV3-48P01763 117 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 CRYGCP07315 174 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 SSX8Q7RTT4 187 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 ZNF738Q8NE65 137 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 ZNF492Q9P255 531 aa11.94□□□□□ -0.5
SMARCA4-219ENST00000592604 C19orf71A6NCJ1 209 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 A8MWL6 223 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 CCL3L1P16619 93 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 REG1BP48304 166 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 OCIAD2Q56VL3 154 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 PVRIGQ6DKI7 326 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 UNQ5815/PRO19632Q6UWF5 114 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 LINC00311Q8N616 119 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 OR2D3Q8NGH3 330 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 TMEM186Q96B77 213 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 CHCHD1Q96BP2 118 aaKnown RBP11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 SSUH2Q9Y2M2 353 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 FAM215AQ9Y5M1 114 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 PLAUP00749 431 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 LINC00322Q6ZN03 302 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 TCF24Q7RTU0 167 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 C8orf31Q8N9H6 132 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 TMEM200BQ69YZ2 307 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 ST6GALNAC6Q969X2 333 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 FMC1Q96HJ9 113 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 GFRA4Q9GZZ7 299 aa11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
SMARCA4-219ENST00000592604 LOC400499M0QZD8 3231 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 A0A1W2PPI3 338 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 FCN3O75636 299 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 LTAP01374 205 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 GTSF1Q8WW33 167 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 TRGV9Q99603 122 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 WASHC3Q9Y3C0 194 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 CD40P25942 277 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 DIAPH2-AS1Q14236 149 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 C22orf34Q6ZV56 151 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 BLNKQ8WV28 456 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 SGK494Q96LW2 274 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 ST20Q9HBF5 79 aa11.92□□□□□ -0.5
SMARCA4-219ENST00000592604 TNFRSF1AP19438 455 aa11.91□□□□□ -0.5
SMARCA4-219ENST00000592604 ORM2P19652 201 aa11.91□□□□□ -0.5
SMARCA4-219ENST00000592604 MRGPRG-AS1Q2M3A8 158 aa11.91□□□□□ -0.5
SMARCA4-219ENST00000592604 RPRMLQ8N4K4 120 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms