RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 LYRM1O43325 122 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 HOXB5P09067 269 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 OR4E1P0C645 316 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 ANXA7P20073 488 aaKnown RBP8.32□□□□□ -1.08
SMAD4-211ENST00000590499 OR10J1P30954 320 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 YPEL3P61236 119 aaPredicted RBP8.32□□□□□ -1.08
SMAD4-211ENST00000590499 CNPY1Q3B7I2 92 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 ETFRF1Q6IPR1 90 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 LYG2Q86SG7 212 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 CCDC32Q9BV29 185 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 EDA2RQ9HAV5 297 aa8.32□□□□□ -1.08
SMAD4-211ENST00000590499 MPTX1A8MV57 137 aa8.31□□□□□ -1.08
SMAD4-211ENST00000590499 SCGB2A1O75556 95 aa8.31□□□□□ -1.08
SMAD4-211ENST00000590499 ADAP1O75689 374 aa8.31□□□□□ -1.08
SMAD4-211ENST00000590499 CRYBB3P26998 211 aa8.31□□□□□ -1.08
SMAD4-211ENST00000590499 NPIPB3Q92617 1050 aa8.31□□□□□ -1.08
SMAD4-211ENST00000590499 C20orf85Q9H1P6 137 aa8.31□□□□□ -1.08
SMAD4-211ENST00000590499 RETNQ9HD89 108 aa8.31□□□□□ -1.08
SMAD4-211ENST00000590499 UBQLN2Q9UHD9 624 aa8.31□□□□□ -1.08
SMAD4-211ENST00000590499 LYSTQ99698 3801 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 IGKV1D-37A0A075B6S9 117 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 IGHV3-66A0A0C4DH42 116 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 PRSS46E5RG02 174 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 SYNGR2O43760 224 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 MED6O75586 246 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 DFFBO76075 338 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 PLA2G1BP04054 148 aaKnown RBP8.3□□□□□ -1.08
SMAD4-211ENST00000590499 IFNA4P05014 189 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 CD5P06127 495 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 IAPPP10997 89 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 NPPCP23582 126 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 BMI1P35226 326 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 GPX4P36969 197 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-211ENST00000590499 GAMTQ14353 236 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 TCF24Q7RTU0 167 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 COQ8AQ8NI60 647 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 MITD1Q8WV92 249 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 ACY3Q96HD9 319 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 CIB3Q96Q77 187 aaPredicted RBP8.3□□□□□ -1.08
SMAD4-211ENST00000590499 METTL26Q96S19 204 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 GGTLC1Q9BX51 225 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 MAGT1Q9H0U3 335 aa8.3□□□□□ -1.08
SMAD4-211ENST00000590499 LOC102724200A0A096LPH7 203 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-211ENST00000590499 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
SMAD4-211ENST00000590499 TOMM40O96008 361 aa8.29□□□□□ -1.08
SMAD4-211ENST00000590499 TCRBP04435 133 aa8.29□□□□□ -1.08
SMAD4-211ENST00000590499 USF2Q15853 346 aaPredicted RBP8.29□□□□□ -1.08
SMAD4-211ENST00000590499 C4orf46Q504U0 113 aa8.29□□□□□ -1.08
SMAD4-211ENST00000590499 OR4D5Q8NGN0 318 aa8.29□□□□□ -1.08
SMAD4-211ENST00000590499 Q8WTZ3 238 aa8.29□□□□□ -1.08
SMAD4-211ENST00000590499 S100ZQ8WXG8 99 aa8.29□□□□□ -1.08
SMAD4-211ENST00000590499 TMEM231Q9H6L2 316 aa8.29□□□□□ -1.08
SMAD4-211ENST00000590499 TBC1D24Q9ULP9 559 aa8.29□□□□□ -1.08
SMAD4-211ENST00000590499 TENM2Q9NT68 2774 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 AGRNO00468 2067 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 IGKV3-7A0A075B6H7 116 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 A0A1W2PS18 150 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 C3orf84H3BNL1 204 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 PSG1P11464 419 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 P2RY1P47900 373 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 TFPI2P48307 235 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 GBGT1Q8N5D6 347 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 MUC7Q8TAX7 377 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 SLC35E1Q96K37 410 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 MS4A6AQ9H2W1 248 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 MAP6D1Q9H9H5 199 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 NUDT15Q9NV35 164 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 PTTG2Q9NZH5 202 aa8.28□□□□□ -1.08
SMAD4-211ENST00000590499 IGKV1OR2-108A0A075B7D4 117 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 WRBO00258 174 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 IFNA21P01568 189 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 IL4P05112 153 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 HNRNPCP07910 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMAD4-211ENST00000590499 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 POLR2GP62487 172 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMAD4-211ENST00000590499 RAB11AP62491 216 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 ZNF90Q03938 601 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 ASAH1Q13510 395 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 APRG1Q8IVJ8 170 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 FAM24BQ8N5W8 94 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 THAP8Q8NA92 274 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 GLMPQ8WWB7 406 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 OVOL2Q9BRP0 275 aa8.27□□□□□ -1.09
SMAD4-211ENST00000590499 TRAV6A0A075B6T7 132 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 KIR2DL5BA0A0G2JN68 375 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 KIR2DL5BA0A0G2JPC4 375 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 ZFP92A6NM28 416 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 H3BP45 60 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 K7EQG2 157 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 NKX2-1P43699 371 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-211ENST00000590499 PAX9P55771 341 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 CMC4P56277 68 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-211ENST00000590499 PAFAH1B2P68402 229 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 RPP30P78346 268 aaKnown RBP8.26□□□□□ -1.09
SMAD4-211ENST00000590499 IAH1Q2TAA2 248 aaPredicted RBP8.26□□□□□ -1.09
SMAD4-211ENST00000590499 SPANXN5Q5MJ07 72 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 KIR2DL5AQ8N109 375 aa8.26□□□□□ -1.09
SMAD4-211ENST00000590499 ZBTB8BQ8NAP8 495 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms