RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 C20orf85Q9H1P6 137 aa13.29□□□□□ -0.28
CIRBP-227ENST00000590188 U3KQE9 123 aa13.29□□□□□ -0.28
CIRBP-227ENST00000590188 KIR2DL5BA0A0G2JN68 375 aa13.28□□□□□ -0.28
CIRBP-227ENST00000590188 KIR2DL5BA0A0G2JPC4 375 aa13.28□□□□□ -0.28
CIRBP-227ENST00000590188 SCGB1D2O95969 90 aa13.28□□□□□ -0.28
CIRBP-227ENST00000590188 IFNA21P01568 189 aa13.28□□□□□ -0.28
CIRBP-227ENST00000590188 ATP5IP56385 69 aaPredicted RBP13.28□□□□□ -0.28
CIRBP-227ENST00000590188 KIR2DL5AQ8N109 375 aa13.28□□□□□ -0.28
CIRBP-227ENST00000590188 KIR2DL5BQ8NHK3 375 aa13.28□□□□□ -0.28
CIRBP-227ENST00000590188 GLMPQ8WWB7 406 aa13.28□□□□□ -0.28
CIRBP-227ENST00000590188 RNF125Q96EQ8 232 aa13.28□□□□□ -0.28
CIRBP-227ENST00000590188 RYR2Q92736 4967 aa13.28□□□□□ -0.28
CIRBP-227ENST00000590188 CSMD3Q7Z407 3707 aa13.27□□□□□ -0.29
CIRBP-227ENST00000590188 TRAV6A0A075B6T7 132 aa13.27□□□□□ -0.29
CIRBP-227ENST00000590188 TRAV2A0A0B4J234 112 aa13.27□□□□□ -0.29
CIRBP-227ENST00000590188 K7EQG2 157 aa13.27□□□□□ -0.29
CIRBP-227ENST00000590188 UBE2CO00762 179 aa13.27□□□□□ -0.29
CIRBP-227ENST00000590188 LYZP61626 148 aa13.27□□□□□ -0.29
CIRBP-227ENST00000590188 RPP30P78346 268 aaKnown RBP13.27□□□□□ -0.29
CIRBP-227ENST00000590188 Q6ZWC4 215 aa13.27□□□□□ -0.29
CIRBP-227ENST00000590188 CSTL1Q9H114 145 aa13.27□□□□□ -0.29
CIRBP-227ENST00000590188 A0A0J9YWU9 116 aa13.26□□□□□ -0.29
CIRBP-227ENST00000590188 HELTA6NFD8 242 aa13.26□□□□□ -0.29
CIRBP-227ENST00000590188 KNCNA6PVL3 124 aa13.26□□□□□ -0.29
CIRBP-227ENST00000590188 SSSCA1O60232 199 aa13.26□□□□□ -0.29
CIRBP-227ENST00000590188 NKX2-1P43699 371 aaPredicted RBP13.26□□□□□ -0.29
CIRBP-227ENST00000590188 EIF2B2P49770 351 aaKnown RBP13.26□□□□□ -0.29
CIRBP-227ENST00000590188 CNPY1Q3B7I2 92 aa13.26□□□□□ -0.29
CIRBP-227ENST00000590188 GSG1LQ6UXU4 331 aa13.26□□□□□ -0.29
CIRBP-227ENST00000590188 OR4D5Q8NGN0 318 aa13.26□□□□□ -0.29
CIRBP-227ENST00000590188 RNF183Q96D59 192 aa13.26□□□□□ -0.29
CIRBP-227ENST00000590188 STRAPQ9Y3F4 350 aaKnown RBP13.26□□□□□ -0.29
CIRBP-227ENST00000590188 IGKV1OR2-108A0A075B7D4 117 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 CCSO14618 274 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 CA1P00915 261 aaPredicted RBP13.25□□□□□ -0.29
CIRBP-227ENST00000590188 TCRBP04435 133 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 ID3Q02535 119 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 IAH1Q2TAA2 248 aaPredicted RBP13.25□□□□□ -0.29
CIRBP-227ENST00000590188 SIGLEC15Q6ZMC9 328 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 STHQ8IWL8 128 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 DCANP1Q8TF63 244 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 PSENENQ9NZ42 101 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 GSKIPQ9P0R6 139 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 TP53TG1Q9Y2A0 90 aa13.25□□□□□ -0.29
CIRBP-227ENST00000590188 SMCO3A2RU48 225 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 PRSS46E5RG02 174 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 BUB3O43684 328 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 CCNKO75909 580 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 EWSR1Q01844 656 aaKnown RBP eCLIP13.24□□□□□ -0.29
CIRBP-227ENST00000590188 AKR1C1Q04828 323 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 PSMG4Q5JS54 123 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 OR8G2PQ6IF36 304 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 ACOT7LQ6ZUV0 252 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 PPP1R14BQ96C90 147 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 SEC22CQ9BRL7 303 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 CCDC32Q9BV29 185 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 NUDT15Q9NV35 164 aa13.24□□□□□ -0.29
CIRBP-227ENST00000590188 FABP1P07148 127 aa13.23□□□□□ -0.29
CIRBP-227ENST00000590188 GATA2P23769 480 aaPredicted RBP13.23□□□□□ -0.29
CIRBP-227ENST00000590188 PMS2P11Q13670 270 aa13.23□□□□□ -0.29
CIRBP-227ENST00000590188 THAP8Q8NA92 274 aa13.23□□□□□ -0.29
CIRBP-227ENST00000590188 ZBTB8BQ8NAP8 495 aaPredicted RBP13.23□□□□□ -0.29
CIRBP-227ENST00000590188 IL17DQ8TAD2 202 aa13.23□□□□□ -0.29
CIRBP-227ENST00000590188 MITD1Q8WV92 249 aa13.23□□□□□ -0.29
CIRBP-227ENST00000590188 TRGV9Q99603 122 aa13.23□□□□□ -0.29
CIRBP-227ENST00000590188 SNRPGP15A8MWD9 76 aa13.22□□□□□ -0.29
CIRBP-227ENST00000590188 FAM25EA8MYX2 175 aa13.22□□□□□ -0.29
CIRBP-227ENST00000590188 AP2S1P53680 142 aaPredicted RBP13.22□□□□□ -0.29
CIRBP-227ENST00000590188 RRAS2P62070 204 aaPredicted RBP13.22□□□□□ -0.29
CIRBP-227ENST00000590188 ACTL10Q5JWF8 245 aa13.22□□□□□ -0.29
CIRBP-227ENST00000590188 NRN1Q9NPD7 142 aa13.22□□□□□ -0.29
CIRBP-227ENST00000590188 A6NHS1 94 aa13.21□□□□□ -0.29
CIRBP-227ENST00000590188 PAX9P55771 341 aa13.21□□□□□ -0.29
CIRBP-227ENST00000590188 TMEM182Q6ZP80 229 aaPredicted RBP13.21□□□□□ -0.29
CIRBP-227ENST00000590188 LYSTQ99698 3801 aa13.21□□□□□ -0.29
CIRBP-227ENST00000590188 TBC1D24Q9ULP9 559 aa13.21□□□□□ -0.29
CIRBP-227ENST00000590188 PLECQ15149 4684 aaKnown RBP13.21□□□□□ -0.3
CIRBP-227ENST00000590188 FAM240BA0A1B0GVZ2 78 aa13.2□□□□□ -0.3
CIRBP-227ENST00000590188 H2AFB2P0C5Z0 115 aa13.2□□□□□ -0.3
CIRBP-227ENST00000590188 METTL15P1P0C7V9 234 aa13.2□□□□□ -0.3
CIRBP-227ENST00000590188 TRPT1Q86TN4 253 aaKnown RBP13.2□□□□□ -0.3
CIRBP-227ENST00000590188 S100ZQ8WXG8 99 aa13.2□□□□□ -0.3
CIRBP-227ENST00000590188 SMIM8Q96KF7 97 aa13.2□□□□□ -0.3
CIRBP-227ENST00000590188 RARRES2Q99969 163 aa13.2□□□□□ -0.3
CIRBP-227ENST00000590188 RCL1Q9Y2P8 373 aaKnown RBP13.2□□□□□ -0.3
CIRBP-227ENST00000590188 CXorf65A6NEN9 183 aa13.19□□□□□ -0.3
CIRBP-227ENST00000590188 ORM2P19652 201 aa13.19□□□□□ -0.3
CIRBP-227ENST00000590188 NUP62P37198 522 aaPredicted RBP13.19□□□□□ -0.3
CIRBP-227ENST00000590188 OR11H2Q8NH07 326 aa13.19□□□□□ -0.3
CIRBP-227ENST00000590188 ZNF431Q8TF32 576 aaPredicted RBP13.19□□□□□ -0.3
CIRBP-227ENST00000590188 RAB40CQ96S21 281 aa13.19□□□□□ -0.3
CIRBP-227ENST00000590188 DOK5Q9P104 306 aa13.19□□□□□ -0.3
CIRBP-227ENST00000590188 PFDN2Q9UHV9 154 aa13.19□□□□□ -0.3
CIRBP-227ENST00000590188 LSM5Q9Y4Y9 91 aaKnown RBP13.19□□□□□ -0.3
CIRBP-227ENST00000590188 AGRNO00468 2067 aa13.18□□□□□ -0.3
CIRBP-227ENST00000590188 LCE6AA0A183 80 aa13.18□□□□□ -0.3
CIRBP-227ENST00000590188 C5orf51A6NDU8 294 aa13.18□□□□□ -0.3
CIRBP-227ENST00000590188 PMS2P5A8MQ11 134 aa13.18□□□□□ -0.3
CIRBP-227ENST00000590188 MBPP02686 304 aaPredicted RBP13.18□□□□□ -0.3
CIRBP-227ENST00000590188 C4BPBP20851 252 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms