RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RBKSQ9H477 322 aa7.82□□□□□ -1.16
SDF2-208ENST00000589788 LSM5Q9Y4Y9 91 aaKnown RBP7.82□□□□□ -1.16
SDF2-208ENST00000589788 SELENOKQ9Y6D0 94 aa7.82□□□□□ -1.16
SDF2-208ENST00000589788 C15orf62A8K5M9 175 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 H0YIZ8 118 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 K7EMT4 169 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 ZNF207O43670 478 aaKnown RBP7.81□□□□□ -1.16
SDF2-208ENST00000589788 SSSCA1O60232 199 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 RLN2P04090 185 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 FRMD6-AS1P0C7T7 363 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 NHLRC4P0CG21 123 aaPredicted RBP7.81□□□□□ -1.16
SDF2-208ENST00000589788 C8orf88P0DMB2 117 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 LYL1P12980 280 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 PVALBP20472 110 aaPredicted RBP7.81□□□□□ -1.16
SDF2-208ENST00000589788 NPY1RP25929 384 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 CD81P60033 236 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 RNF151Q2KHN1 245 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 Q5BKY6 102 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 C11orf87Q6NUJ2 197 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 RBPMS2Q6ZRY4 209 aaKnown RBP7.81□□□□□ -1.16
SDF2-208ENST00000589788 TMEM61Q8N0U2 210 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 THAP6Q8TBB0 222 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 RNASEH2CQ8TDP1 164 aaKnown RBP7.81□□□□□ -1.16
SDF2-208ENST00000589788 DTD1Q8TEA8 209 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 PPP1R14BQ96C90 147 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 CIB3Q96Q77 187 aaPredicted RBP7.81□□□□□ -1.16
SDF2-208ENST00000589788 RAB40CQ96S21 281 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 ASCL2Q99929 193 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 MAGT1Q9H0U3 335 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 C11orf1Q9H5F2 150 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 TUBA4BQ9H853 241 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 MBD2Q9UBB5 411 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 MLXQ9UH92 298 aa7.81□□□□□ -1.16
SDF2-208ENST00000589788 ZNF785A8K8V0 405 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 E5RGE8 158 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 NPIPB6E9PJ23 425 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 SMLR1H3BR10 107 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 SCAF4O95104 1147 aaKnown RBP7.8□□□□□ -1.16
SDF2-208ENST00000589788 IGHV4-30-4P0DP06 118 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 SLC25A4P12235 298 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 TAS2R30P59541 319 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 ZFP69Q49AA0 526 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 GAGE13Q4V321 117 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 ETFRF1Q6IPR1 90 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 ZNF600Q6ZNG1 722 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 OR4X1Q8NH49 305 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 SMIM8Q96KF7 97 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 RNF126Q9BV68 326 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 FNDC4Q9H6D8 234 aaPredicted RBP7.8□□□□□ -1.16
SDF2-208ENST00000589788 OR5AC2Q9NZP5 309 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 U3KQ87 197 aa7.8□□□□□ -1.16
SDF2-208ENST00000589788 TRAV30A0A087WSZ9 112 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 TRAV25A0A0B4J276 109 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
SDF2-208ENST00000589788 L7N2F9 121 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 TSC22D2O75157 780 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 CLN5O75503 358 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 TMEM50AO95807 157 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 GYPEP15421 78 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 PAX9P55771 341 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 VAMP2P63027 116 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 XP32Q5T750 250 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 LAMTOR1Q6IAA8 161 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 SLC16A13Q7RTY0 426 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 TMEM116Q8NCL8 245 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 OR11H4Q8NGC9 324 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 HYLS1Q96M11 299 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 GINS3Q9BRX5 216 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 LYRM2Q9NU23 88 aaPredicted RBP7.79□□□□□ -1.16
SDF2-208ENST00000589788 SMPXQ9UHP9 88 aa7.79□□□□□ -1.16
SDF2-208ENST00000589788 PUS1Q9Y606 427 aaKnown RBP eCLIP7.79□□□□□ -1.16
SDF2-208ENST00000589788 PRKDCP78527 4128 aaKnown RBP7.79□□□□□ -1.16
SDF2-208ENST00000589788 FXYD6-FXYD2A0A087WZ82 144 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 IGHV7-4-1A0A0J9YVY3 117 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 HMSDA8MTL9 139 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 A8MZ25 164 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 IFNA4P05014 189 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 CD7P09564 240 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 IAPPP10997 89 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 BMI1P35226 326 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 P2RY1P47900 373 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 RND2P52198 227 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 ATP5IP56385 69 aaPredicted RBP7.78□□□□□ -1.16
SDF2-208ENST00000589788 TOMM20LQ6UXN7 152 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 PSENENQ9NZ42 101 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 MRPL36Q9P0J6 103 aaKnown RBP7.78□□□□□ -1.16
SDF2-208ENST00000589788 PAIP2BQ9ULR5 123 aaKnown RBP7.78□□□□□ -1.16
SDF2-208ENST00000589788 TNFSF18Q9UNG2 199 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 U3KQK5 164 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 IGHV3-49A0A0A0MS15 119 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 OR11H12B2RN74 326 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 RAB11AP62491 216 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 RPP30P78346 268 aaKnown RBP7.78□□□□□ -1.16
SDF2-208ENST00000589788 TIGITQ495A1 244 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 ZNF546Q86UE3 836 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 SBSPONQ8IVN8 264 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 TMEM170AQ8WVE7 144 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 ACY3Q96HD9 319 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 AQP10Q96PS8 301 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 SPAG8Q99932 426 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms