RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CENPWQ5EE01 88 aa11.98□□□□□ -0.49
CDK5RAP3-236ENST00000584991 C1orf194Q5T5A4 169 aa11.98□□□□□ -0.49
CDK5RAP3-236ENST00000584991 RASL11AQ6T310 242 aa11.98□□□□□ -0.49
CDK5RAP3-236ENST00000584991 MRPL52Q86TS9 123 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-236ENST00000584991 MBD6Q96DN6 1003 aa11.98□□□□□ -0.49
CDK5RAP3-236ENST00000584991 HARBI1Q96MB7 349 aa11.98□□□□□ -0.49
CDK5RAP3-236ENST00000584991 PSMB11A5LHX3 300 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 BUB1B-PAK6H3BSN5 160 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 OR7C2O60412 319 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ACTL6BO94805 426 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TOX4O94842 621 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 Q5PR19 223 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 OR11H6Q8NGC7 330 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ZNF503Q96F45 646 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 NAGKQ9UJ70 344 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 INSIG2Q9Y5U4 225 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 A0A1W2PRD5 423 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 A0A1W2PRF3 423 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 A0A1W2PRM7 423 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 HOXB4P17483 251 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 CRYBB3P26998 211 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 OR10J3Q5JRS4 329 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TGIF2LXQ8IUE1 241 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TMEM256Q8N2U0 113 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 OR1L6Q8NGR2 347 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TBX15Q96SF7 602 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 CHRDL1Q9BU40 450 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 CDC42EP3Q9UKI2 254 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 AMMECR1Q9Y4X0 333 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 APCP25054 2843 aa11.97□□□□□ -0.49
CDK5RAP3-236ENST00000584991 A0A096LNT2 108 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 FCN1O00602 326 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 SCGB1D1O95968 90 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 LGALS7P47929 136 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 BPIFB3P59826 476 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 PRSS8Q16651 343 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ETFRF1Q6IPR1 90 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 THAP8Q8NA92 274 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 STXBP6Q8NFX7 210 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 WASHC3Q9Y3C0 194 aa11.96□□□□□ -0.49
CDK5RAP3-236ENST00000584991 SMIM27A0A1W2PRY6 76 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 MYOD1P15172 320 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 LDLRAD2Q5SZI1 272 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 FAM231DQ6ZW35 169 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 TMEM190Q8WZ59 177 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 SMIM12Q96EX1 92 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 KIR2DL5BA0A0G2JN68 375 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 KIR2DL5BA0A0G2JPC4 375 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 TCRBV4S1A1TA0A5B7 111 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 ODF3BA8MYP8 253 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 RNF223E7ERA6 249 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 LY6LH3BQJ8 138 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 SLC17A3O00476 420 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 HLA-DQA1P01909 254 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 MSMBP08118 114 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 CBLN1P23435 193 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 HTR1DP28221 377 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 SUMO1P63165 101 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 PAX8Q06710 450 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 KIR2DL5AQ8N109 375 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 RPEQ96AT9 228 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 FAM167A-AS1Q96KT0 104 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 IGF2BP2-AS1Q96M15 143 aa11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 ZNF430Q9H8G1 570 aaPredicted RBP11.95□□□□□ -0.5
CDK5RAP3-236ENST00000584991 SNURFLB1AK76 121 aa11.94□□□□□ -0.5
CDK5RAP3-236ENST00000584991 GGTLC3B5MD39 225 aa11.94□□□□□ -0.5
CDK5RAP3-236ENST00000584991 VMA21Q3ZAQ7 101 aa11.94□□□□□ -0.5
CDK5RAP3-236ENST00000584991 IBA57Q5T440 356 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-236ENST00000584991 PVRIGQ6DKI7 326 aa11.94□□□□□ -0.5
CDK5RAP3-236ENST00000584991 LHFPL4Q7Z7J7 247 aa11.94□□□□□ -0.5
CDK5RAP3-236ENST00000584991 MAPK1IP1LQ8NDC0 245 aa11.94□□□□□ -0.5
CDK5RAP3-236ENST00000584991 DPM3Q9P2X0 92 aa11.94□□□□□ -0.5
CDK5RAP3-236ENST00000584991 NAV2Q8IVL1 2488 aa11.94□□□□□ -0.5
CDK5RAP3-236ENST00000584991 B4DSR2 109 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 IGLV2-8P01709 118 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 REG1AP05451 166 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 HNF1AP20823 631 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 IER3P46695 156 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 TPTE2P1Q5T6R2 138 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 PRSS57Q6UWY2 283 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 KRTAP1-3Q8IUG1 177 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 OR8I2Q8N0Y5 310 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 OR5AU1Q8NGC0 362 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 OR10W1Q8NGF6 305 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 WIPF2Q8TF74 440 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 Q96MF0 132 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 SLC25A2Q9BXI2 301 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 FASNP49327 2511 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 IGHV3-72A0A0B4J1Y9 119 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 IGHV1-3A0A0C4DH29 117 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 COMPP49747 757 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 LOXL1Q08397 574 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 C10orf113Q5VZT2 155 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 MOB3BQ86TA1 216 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 BAGE3Q86Y29 109 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 BAGE2Q86Y30 109 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 HILPDAQ9Y5L2 63 aa11.93□□□□□ -0.5
CDK5RAP3-236ENST00000584991 CR1P17927 2039 aa11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 NUPR1O60356 82 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms