RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 M0QYG6 137 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 NUDT3O95989 172 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 TOMM40O96008 361 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 ALDH3B2P48448 385 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 PSMB3P49720 205 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 RORCP51449 518 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 SP6Q3SY56 376 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 FAM78BQ5VT40 261 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 OR51G1Q8NGK1 321 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 OR52E5Q8NH55 327 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 ACY3Q96HD9 319 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 WDR12Q9GZL7 423 aaKnown RBP6.99□□□□□ -1.29
RFFL-208ENST00000581039 COPZ2Q9P299 210 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 APOBP04114 4563 aaKnown RBP6.99□□□□□ -1.29
RFFL-208ENST00000581039 DNAH5Q8TE73 4624 aa6.99□□□□□ -1.29
RFFL-208ENST00000581039 A0A0G2JRQ6 117 aa6.98□□□□□ -1.29
RFFL-208ENST00000581039 CEBPZOSA8MTT3 80 aa6.98□□□□□ -1.29
RFFL-208ENST00000581039 PSG1P11464 419 aa6.98□□□□□ -1.29
RFFL-208ENST00000581039 RPS19P39019 145 aaKnown RBP6.98□□□□□ -1.29
RFFL-208ENST00000581039 ZNF79Q15937 498 aa6.98□□□□□ -1.29
RFFL-208ENST00000581039 NOXA1Q86UR1 476 aa6.98□□□□□ -1.29
RFFL-208ENST00000581039 SNX29P2Q8IUI4 249 aa6.98□□□□□ -1.29
RFFL-208ENST00000581039 SLC24A4Q8NFF2 622 aa6.98□□□□□ -1.29
RFFL-208ENST00000581039 RNF125Q96EQ8 232 aa6.98□□□□□ -1.29
RFFL-208ENST00000581039 PBDC1Q9BVG4 233 aa6.98□□□□□ -1.29
RFFL-208ENST00000581039 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 F5H768 121 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 F6UB75 175 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 B3GALNT1O75752 331 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 DEFB130BP0DP73 79 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 DEFB130AP0DP74 79 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 UCP1P25874 307 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 TGFBR1P36897 503 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 PAX9P55771 341 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 NEDD8Q15843 81 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 AARDQ4LEZ3 155 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 OR8G2PQ6IF36 304 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 FAM219AQ8IW50 185 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 CCDC71LQ8N9Z2 235 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 ZFAND1Q8TCF1 268 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 COMMD3Q9UBI1 195 aa6.97□□□□□ -1.29
RFFL-208ENST00000581039 A0A0J9YX75 114 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 EPM2AB3EWF7 344 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 ISLRO14498 428 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 SOCS3O14543 225 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 NXPH3O95157 252 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 APOA1P02647 267 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 KLF9Q13886 244 aaPredicted RBP6.96□□□□□ -1.3
RFFL-208ENST00000581039 CLINT1Q14677 625 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 RNASE10Q5GAN6 216 aaKnown RBP6.96□□□□□ -1.3
RFFL-208ENST00000581039 C1orf194Q5T5A4 169 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 SAMD13Q5VXD3 122 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 LHFPL1Q86WI0 220 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 ARRDC1Q8N5I2 433 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 PPP1R14BQ96C90 147 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 IGF2BP2-AS1Q96M15 143 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 ABHD1Q96SE0 405 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 Q9H521 79 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 Q9H8V8 135 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 RPRMQ9NS64 109 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 LINC00588Q9Y4M8 146 aa6.96□□□□□ -1.3
RFFL-208ENST00000581039 DMBT1Q9UGM3 2413 aaPredicted RBP6.95□□□□□ -1.3
RFFL-208ENST00000581039 ZFP92A6NM28 416 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 ZNF705GA8MUZ8 300 aaPredicted RBP6.95□□□□□ -1.3
RFFL-208ENST00000581039 CDS2O95674 445 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 PRM2P04554 102 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 ATP5G1P05496 136 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 ATP5G3P48201 142 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 LSM3P62310 102 aaKnown RBP6.95□□□□□ -1.3
RFFL-208ENST00000581039 SUPT4H1P63272 117 aaKnown RBP6.95□□□□□ -1.3
RFFL-208ENST00000581039 SSX7Q7RTT5 188 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 OR8I2Q8N0Y5 310 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 TERB2Q8NHR7 220 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 TMEM170AQ8WVE7 144 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 GPR146Q96CH1 333 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 C16orf92Q96LL3 132 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 TMEM222Q9H0R3 208 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 DOK5Q9P104 306 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 CACNG5Q9UF02 275 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 CACFD1Q9UGQ2 172 aa6.95□□□□□ -1.3
RFFL-208ENST00000581039 TEX13DA0A0J9YY54 714 aaPredicted RBP6.94□□□□□ -1.3
RFFL-208ENST00000581039 CBY3A6NI87 242 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 SNRPGP15A8MWD9 76 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 CD3DP04234 171 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 FABP1P07148 127 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 INAFM2P0DMQ5 153 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 KRTAP10-2P60368 255 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 LYZP61626 148 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 B2MP61769 119 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 ZNF90Q03938 601 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 FCN2Q15485 313 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 RNASE12Q5GAN4 147 aaKnown RBP6.94□□□□□ -1.3
RFFL-208ENST00000581039 SELENOHQ8IZQ5 122 aaKnown RBP6.94□□□□□ -1.3
RFFL-208ENST00000581039 OR4C16Q8NGL9 310 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 OR13C8Q8NGS7 320 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 RBPMSQ93062 196 aaKnown RBP6.94□□□□□ -1.3
RFFL-208ENST00000581039 U3KQ87 197 aa6.94□□□□□ -1.3
RFFL-208ENST00000581039 GABARAPH6UMI1 98 aa6.93□□□□□ -1.3
RFFL-208ENST00000581039 DUSP14O95147 198 aaKnown RBP6.93□□□□□ -1.3
RFFL-208ENST00000581039 GABARAPO95166 117 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms