RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 C20orf85Q9H1P6 137 aa19.79■□□□□ 0.76
LINC00271-207ENST00000580741 TRAV2A0A0B4J234 112 aa19.78■□□□□ 0.76
LINC00271-207ENST00000580741 C16orf54Q6UWD8 224 aa19.78■□□□□ 0.76
LINC00271-207ENST00000580741 Q6ZWC4 215 aa19.78■□□□□ 0.76
LINC00271-207ENST00000580741 K7EQG2 157 aa19.77■□□□□ 0.76
LINC00271-207ENST00000580741 UBE2CO00762 179 aa19.77■□□□□ 0.76
LINC00271-207ENST00000580741 SPRY2O43597 315 aa19.77■□□□□ 0.76
LINC00271-207ENST00000580741 IFNA21P01568 189 aa19.77■□□□□ 0.76
LINC00271-207ENST00000580741 POLR2GP62487 172 aaKnown RBP eCLIP19.77■□□□□ 0.76
LINC00271-207ENST00000580741 SPANXN5Q5MJ07 72 aa19.77■□□□□ 0.76
LINC00271-207ENST00000580741 GLMPQ8WWB7 406 aa19.77■□□□□ 0.76
LINC00271-207ENST00000580741 PBDC1Q9BVG4 233 aa19.77■□□□□ 0.76
LINC00271-207ENST00000580741 RYR2Q92736 4967 aa19.76■□□□□ 0.75
LINC00271-207ENST00000580741 ID3Q02535 119 aa19.76■□□□□ 0.75
LINC00271-207ENST00000580741 OR4D5Q8NGN0 318 aa19.76■□□□□ 0.75
LINC00271-207ENST00000580741 RNF125Q96EQ8 232 aa19.76■□□□□ 0.75
LINC00271-207ENST00000580741 ZNF688P0C7X2 276 aa19.75■□□□□ 0.75
LINC00271-207ENST00000580741 RPP30P78346 268 aaKnown RBP19.75■□□□□ 0.75
LINC00271-207ENST00000580741 OR2F1Q13607 317 aa19.75■□□□□ 0.75
LINC00271-207ENST00000580741 TP53TG1Q9Y2A0 90 aa19.75■□□□□ 0.75
LINC00271-207ENST00000580741 TRAV6A0A075B6T7 132 aa19.74■□□□□ 0.75
LINC00271-207ENST00000580741 PRSS46E5RG02 174 aa19.74■□□□□ 0.75
LINC00271-207ENST00000580741 NKX2-1P43699 371 aaPredicted RBP19.74■□□□□ 0.75
LINC00271-207ENST00000580741 CNPY1Q3B7I2 92 aa19.74■□□□□ 0.75
LINC00271-207ENST00000580741 DCANP1Q8TF63 244 aa19.74■□□□□ 0.75
LINC00271-207ENST00000580741 RNF183Q96D59 192 aa19.74■□□□□ 0.75
LINC00271-207ENST00000580741 CCDC32Q9BV29 185 aa19.74■□□□□ 0.75
LINC00271-207ENST00000580741 CSTL1Q9H114 145 aa19.74■□□□□ 0.75
LINC00271-207ENST00000580741 IGKV1OR2-108A0A075B7D4 117 aa19.73■□□□□ 0.75
LINC00271-207ENST00000580741 HELTA6NFD8 242 aa19.73■□□□□ 0.75
LINC00271-207ENST00000580741 BUB3O43684 328 aa19.73■□□□□ 0.75
LINC00271-207ENST00000580741 SSSCA1O60232 199 aa19.73■□□□□ 0.75
LINC00271-207ENST00000580741 TCRBP04435 133 aa19.73■□□□□ 0.75
LINC00271-207ENST00000580741 EIF2B2P49770 351 aaKnown RBP19.73■□□□□ 0.75
LINC00271-207ENST00000580741 LYZP61626 148 aa19.73■□□□□ 0.75
LINC00271-207ENST00000580741 MITD1Q8WV92 249 aa19.73■□□□□ 0.75
LINC00271-207ENST00000580741 STRAPQ9Y3F4 350 aaKnown RBP19.73■□□□□ 0.75
LINC00271-207ENST00000580741 SCGB1D2O95969 90 aa19.72■□□□□ 0.75
LINC00271-207ENST00000580741 IAH1Q2TAA2 248 aaPredicted RBP19.72■□□□□ 0.75
LINC00271-207ENST00000580741 THAP8Q8NA92 274 aa19.72■□□□□ 0.75
LINC00271-207ENST00000580741 TENM2Q9NT68 2774 aa19.72■□□□□ 0.75
LINC00271-207ENST00000580741 A0A0J9YWU9 116 aa19.71■□□□□ 0.75
LINC00271-207ENST00000580741 TRGV9Q99603 122 aa19.71■□□□□ 0.75
LINC00271-207ENST00000580741 NUDT15Q9NV35 164 aa19.71■□□□□ 0.75
LINC00271-207ENST00000580741 PSENENQ9NZ42 101 aa19.71■□□□□ 0.75
LINC00271-207ENST00000580741 A6NHS1 94 aa19.7■□□□□ 0.74
LINC00271-207ENST00000580741 KNCNA6PVL3 124 aa19.7■□□□□ 0.74
LINC00271-207ENST00000580741 CCSO14618 274 aa19.7■□□□□ 0.74
LINC00271-207ENST00000580741 SIGLEC15Q6ZMC9 328 aa19.7■□□□□ 0.74
LINC00271-207ENST00000580741 ACOT7LQ6ZUV0 252 aa19.7■□□□□ 0.74
LINC00271-207ENST00000580741 ZBTB8BQ8NAP8 495 aaPredicted RBP19.7■□□□□ 0.74
LINC00271-207ENST00000580741 LYSTQ99698 3801 aa19.7■□□□□ 0.74
LINC00271-207ENST00000580741 SEC22CQ9BRL7 303 aa19.7■□□□□ 0.74
LINC00271-207ENST00000580741 FABP1P07148 127 aa19.69■□□□□ 0.74
LINC00271-207ENST00000580741 AP2S1P53680 142 aaPredicted RBP19.69■□□□□ 0.74
LINC00271-207ENST00000580741 EWSR1Q01844 656 aaKnown RBP eCLIP19.69■□□□□ 0.74
LINC00271-207ENST00000580741 OR8G2PQ6IF36 304 aa19.69■□□□□ 0.74
LINC00271-207ENST00000580741 STHQ8IWL8 128 aa19.69■□□□□ 0.74
LINC00271-207ENST00000580741 GSKIPQ9P0R6 139 aa19.69■□□□□ 0.74
LINC00271-207ENST00000580741 PLECQ15149 4684 aaKnown RBP19.69■□□□□ 0.74
LINC00271-207ENST00000580741 SNRPGP15A8MWD9 76 aa19.68■□□□□ 0.74
LINC00271-207ENST00000580741 CCNKO75909 580 aa19.68■□□□□ 0.74
LINC00271-207ENST00000580741 CA1P00915 261 aaPredicted RBP19.68■□□□□ 0.74
LINC00271-207ENST00000580741 AKR1C1Q04828 323 aa19.68■□□□□ 0.74
LINC00271-207ENST00000580741 PSMG4Q5JS54 123 aa19.68■□□□□ 0.74
LINC00271-207ENST00000580741 IL17DQ8TAD2 202 aa19.68■□□□□ 0.74
LINC00271-207ENST00000580741 TBC1D24Q9ULP9 559 aa19.68■□□□□ 0.74
LINC00271-207ENST00000580741 AGRNO00468 2067 aa19.67■□□□□ 0.74
LINC00271-207ENST00000580741 PAX9P55771 341 aa19.67■□□□□ 0.74
LINC00271-207ENST00000580741 LINC00299Q6ZSB3 139 aa19.67■□□□□ 0.74
LINC00271-207ENST00000580741 S100ZQ8WXG8 99 aa19.67■□□□□ 0.74
LINC00271-207ENST00000580741 NRN1Q9NPD7 142 aa19.67■□□□□ 0.74
LINC00271-207ENST00000580741 SMCO3A2RU48 225 aa19.66■□□□□ 0.74
LINC00271-207ENST00000580741 GATA2P23769 480 aaPredicted RBP19.66■□□□□ 0.74
LINC00271-207ENST00000580741 ACTL10Q5JWF8 245 aa19.66■□□□□ 0.74
LINC00271-207ENST00000580741 GSG1LQ6UXU4 331 aa19.66■□□□□ 0.74
LINC00271-207ENST00000580741 SMIM8Q96KF7 97 aa19.66■□□□□ 0.74
LINC00271-207ENST00000580741 PMS2P5A8MQ11 134 aa19.65■□□□□ 0.74
LINC00271-207ENST00000580741 H2AFB2P0C5Z0 115 aa19.65■□□□□ 0.74
LINC00271-207ENST00000580741 NUP62P37198 522 aaPredicted RBP19.65■□□□□ 0.74
LINC00271-207ENST00000580741 TMEM182Q6ZP80 229 aaPredicted RBP19.65■□□□□ 0.74
LINC00271-207ENST00000580741 TRPT1Q86TN4 253 aaKnown RBP19.65■□□□□ 0.74
LINC00271-207ENST00000580741 ZNF431Q8TF32 576 aaPredicted RBP19.65■□□□□ 0.74
LINC00271-207ENST00000580741 PPP1R14BQ96C90 147 aa19.65■□□□□ 0.74
LINC00271-207ENST00000580741 RCL1Q9Y2P8 373 aaKnown RBP19.65■□□□□ 0.74
LINC00271-207ENST00000580741 FAM240BA0A1B0GVZ2 78 aa19.64■□□□□ 0.73
LINC00271-207ENST00000580741 FAM25EA8MYX2 175 aa19.64■□□□□ 0.73
LINC00271-207ENST00000580741 METTL15P1P0C7V9 234 aa19.64■□□□□ 0.73
LINC00271-207ENST00000580741 PFDN2Q9UHV9 154 aa19.64■□□□□ 0.73
LINC00271-207ENST00000580741 MBPP02686 304 aaPredicted RBP19.63■□□□□ 0.73
LINC00271-207ENST00000580741 RRAS2P62070 204 aaPredicted RBP19.63■□□□□ 0.73
LINC00271-207ENST00000580741 TMEM14EPQ6UXP3 125 aa19.63■□□□□ 0.73
LINC00271-207ENST00000580741 DNAH1Q9P2D7 4330 aa19.62■□□□□ 0.73
LINC00271-207ENST00000580741 PMS2P11Q13670 270 aa19.62■□□□□ 0.73
LINC00271-207ENST00000580741 TMEM144Q7Z5S9 345 aa19.62■□□□□ 0.73
LINC00271-207ENST00000580741 GATAD1Q8WUU5 269 aa19.62■□□□□ 0.73
LINC00271-207ENST00000580741 RAB40CQ96S21 281 aa19.62■□□□□ 0.73
LINC00271-207ENST00000580741 RARRES2Q99969 163 aa19.62■□□□□ 0.73
LINC00271-207ENST00000580741 LCE6AA0A183 80 aa19.61■□□□□ 0.73
LINC00271-207ENST00000580741 GIG44P09565 113 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms