RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 DCANP1Q8TF63 244 aa11.4□□□□□ -0.58
PMP22-208ENST00000580584 SLC35E1Q96K37 410 aa11.4□□□□□ -0.58
PMP22-208ENST00000580584 WRBO00258 174 aa11.39□□□□□ -0.59
PMP22-208ENST00000580584 MED6O75586 246 aa11.39□□□□□ -0.59
PMP22-208ENST00000580584 CA1P00915 261 aaPredicted RBP11.39□□□□□ -0.59
PMP22-208ENST00000580584 GPX4P36969 197 aaPredicted RBP11.39□□□□□ -0.59
PMP22-208ENST00000580584 ATP5IP56385 69 aaPredicted RBP11.39□□□□□ -0.59
PMP22-208ENST00000580584 DHRS2Q13268 280 aa11.39□□□□□ -0.59
PMP22-208ENST00000580584 PMS2P11Q13670 270 aa11.39□□□□□ -0.59
PMP22-208ENST00000580584 RNF125Q96EQ8 232 aa11.39□□□□□ -0.59
PMP22-208ENST00000580584 PBDC1Q9BVG4 233 aa11.39□□□□□ -0.59
PMP22-208ENST00000580584 HELTA6NFD8 242 aa11.38□□□□□ -0.59
PMP22-208ENST00000580584 KNCNA6PVL3 124 aa11.38□□□□□ -0.59
PMP22-208ENST00000580584 H3BP45 60 aa11.38□□□□□ -0.59
PMP22-208ENST00000580584 SYNGR2O43760 224 aa11.38□□□□□ -0.59
PMP22-208ENST00000580584 OR4E1P0C645 316 aa11.38□□□□□ -0.59
PMP22-208ENST00000580584 EIF2B2P49770 351 aaKnown RBP11.38□□□□□ -0.59
PMP22-208ENST00000580584 RAB11AP62491 216 aa11.38□□□□□ -0.59
PMP22-208ENST00000580584 STHQ8IWL8 128 aa11.38□□□□□ -0.59
PMP22-208ENST00000580584 CXorf65A6NEN9 183 aa11.37□□□□□ -0.59
PMP22-208ENST00000580584 CENPXA8MT69 81 aa11.37□□□□□ -0.59
PMP22-208ENST00000580584 OR2F1Q13607 317 aa11.37□□□□□ -0.59
PMP22-208ENST00000580584 C4orf46Q504U0 113 aa11.37□□□□□ -0.59
PMP22-208ENST00000580584 SPANXN5Q5MJ07 72 aa11.37□□□□□ -0.59
PMP22-208ENST00000580584 COQ8AQ8NI60 647 aa11.37□□□□□ -0.59
PMP22-208ENST00000580584 CIB3Q96Q77 187 aaPredicted RBP11.37□□□□□ -0.59
PMP22-208ENST00000580584 NDUFA13Q9P0J0 144 aa11.37□□□□□ -0.59
PMP22-208ENST00000580584 IGKV1OR2-108A0A075B7D4 117 aa11.36□□□□□ -0.59
PMP22-208ENST00000580584 PRSS46E5RG02 174 aa11.36□□□□□ -0.59
PMP22-208ENST00000580584 BUB3O43684 328 aa11.36□□□□□ -0.59
PMP22-208ENST00000580584 LYZP61626 148 aa11.36□□□□□ -0.59
PMP22-208ENST00000580584 POLR2GP62487 172 aaKnown RBP eCLIP11.36□□□□□ -0.59
PMP22-208ENST00000580584 PSMG4Q5JS54 123 aa11.36□□□□□ -0.59
PMP22-208ENST00000580584 ACTL10Q5JWF8 245 aa11.36□□□□□ -0.59
PMP22-208ENST00000580584 SIGLEC15Q6ZMC9 328 aa11.36□□□□□ -0.59
PMP22-208ENST00000580584 C7orf50Q9BRJ6 194 aaKnown RBP11.36□□□□□ -0.59
PMP22-208ENST00000580584 PLA2G10O15496 165 aa11.35□□□□□ -0.59
PMP22-208ENST00000580584 RPP30P78346 268 aaKnown RBP11.35□□□□□ -0.59
PMP22-208ENST00000580584 OR8G2PQ6IF36 304 aa11.35□□□□□ -0.59
PMP22-208ENST00000580584 TRPT1Q86TN4 253 aaKnown RBP11.35□□□□□ -0.59
PMP22-208ENST00000580584 OR11H2Q8NH07 326 aa11.35□□□□□ -0.59
PMP22-208ENST00000580584 GATAD1Q8WUU5 269 aa11.35□□□□□ -0.59
PMP22-208ENST00000580584 RARRES2Q99969 163 aa11.35□□□□□ -0.59
PMP22-208ENST00000580584 NRN1Q9NPD7 142 aa11.35□□□□□ -0.59
PMP22-208ENST00000580584 DNAH1Q9P2D7 4330 aa11.35□□□□□ -0.59
PMP22-208ENST00000580584 SSSCA1O60232 199 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 IFNA21P01568 189 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 FABP1P07148 127 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
PMP22-208ENST00000580584 C4BPBP20851 252 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 AP2S1P53680 142 aaPredicted RBP11.34□□□□□ -0.59
PMP22-208ENST00000580584 ID3Q02535 119 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 GSG1LQ6UXU4 331 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 ACOT7LQ6ZUV0 252 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 THAP8Q8NA92 274 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 OR4D5Q8NGN0 318 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 TRGV9Q99603 122 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 C20orf85Q9H1P6 137 aa11.34□□□□□ -0.59
PMP22-208ENST00000580584 STRAPQ9Y3F4 350 aaKnown RBP11.34□□□□□ -0.59
PMP22-208ENST00000580584 LYRM1O43325 122 aa11.33□□□□□ -0.6
PMP22-208ENST00000580584 JTBO76095 146 aa11.33□□□□□ -0.6
PMP22-208ENST00000580584 SCGB1D2O95969 90 aa11.33□□□□□ -0.6
PMP22-208ENST00000580584 NUP62P37198 522 aaPredicted RBP11.33□□□□□ -0.6
PMP22-208ENST00000580584 NKX2-1P43699 371 aaPredicted RBP11.33□□□□□ -0.6
PMP22-208ENST00000580584 RAB40CQ96S21 281 aa11.33□□□□□ -0.6
PMP22-208ENST00000580584 ALMS1Q8TCU4 4167 aa11.32□□□□□ -0.6
PMP22-208ENST00000580584 PLECQ15149 4684 aaKnown RBP11.32□□□□□ -0.6
PMP22-208ENST00000580584 SNRPGP15A8MWD9 76 aa11.32□□□□□ -0.6
PMP22-208ENST00000580584 DEFB4AO15263 64 aa11.32□□□□□ -0.6
PMP22-208ENST00000580584 SNRPD3P62318 126 aaKnown RBP11.32□□□□□ -0.6
PMP22-208ENST00000580584 AKR1C1Q04828 323 aa11.32□□□□□ -0.6
PMP22-208ENST00000580584 IAH1Q2TAA2 248 aaPredicted RBP11.32□□□□□ -0.6
PMP22-208ENST00000580584 TMEM217Q8N7C4 229 aa11.32□□□□□ -0.6
PMP22-208ENST00000580584 MITD1Q8WV92 249 aa11.32□□□□□ -0.6
PMP22-208ENST00000580584 PPP1R14BQ96C90 147 aa11.32□□□□□ -0.6
PMP22-208ENST00000580584 WDR12Q9GZL7 423 aaKnown RBP11.32□□□□□ -0.6
PMP22-208ENST00000580584 PSENENQ9NZ42 101 aa11.32□□□□□ -0.6
PMP22-208ENST00000580584 HYDINQ4G0P3 5121 aa11.32□□□□□ -0.6
PMP22-208ENST00000580584 TRAV6A0A075B6T7 132 aa11.31□□□□□ -0.6
PMP22-208ENST00000580584 CCSO14618 274 aa11.31□□□□□ -0.6
PMP22-208ENST00000580584 CCNKO75909 580 aa11.31□□□□□ -0.6
PMP22-208ENST00000580584 SPP1P10451 314 aa11.31□□□□□ -0.6
PMP22-208ENST00000580584 ATF4P18848 351 aaPredicted RBP11.31□□□□□ -0.6
PMP22-208ENST00000580584 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
PMP22-208ENST00000580584 TMEM182Q6ZP80 229 aaPredicted RBP11.31□□□□□ -0.6
PMP22-208ENST00000580584 CLEC5AQ9NY25 188 aa11.31□□□□□ -0.6
PMP22-208ENST00000580584 PFDN2Q9UHV9 154 aa11.31□□□□□ -0.6
PMP22-208ENST00000580584 SMCO3A2RU48 225 aa11.3□□□□□ -0.6
PMP22-208ENST00000580584 NUPR2A6NF83 97 aa11.3□□□□□ -0.6
PMP22-208ENST00000580584 PAX9P55771 341 aa11.3□□□□□ -0.6
PMP22-208ENST00000580584 DEFB1P60022 68 aa11.3□□□□□ -0.6
PMP22-208ENST00000580584 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
PMP22-208ENST00000580584 ZBTB8BQ8NAP8 495 aaPredicted RBP11.3□□□□□ -0.6
PMP22-208ENST00000580584 C11orf68Q9H3H3 251 aaKnown RBP11.3□□□□□ -0.6
PMP22-208ENST00000580584 NUDT15Q9NV35 164 aa11.3□□□□□ -0.6
PMP22-208ENST00000580584 GSKIPQ9P0R6 139 aa11.3□□□□□ -0.6
PMP22-208ENST00000580584 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
PMP22-208ENST00000580584 TCRBP04435 133 aa11.29□□□□□ -0.6
PMP22-208ENST00000580584 METTL15P1P0C7V9 234 aa11.29□□□□□ -0.6
PMP22-208ENST00000580584 ORM2P19652 201 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms