RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 TXNL4BQ9NX01 149 aaKnown RBP4.94□□□□□ -1.62
COPS3-216ENST00000579716 SLC25A15Q9Y619 301 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 MARF1Q9Y4F3 1742 aaKnown RBP4.94□□□□□ -1.62
COPS3-216ENST00000579716 PTPN23Q9H3S7 1636 aa4.94□□□□□ -1.62
COPS3-216ENST00000579716 ZNF638Q14966 1978 aaKnown RBP4.93□□□□□ -1.62
COPS3-216ENST00000579716 IGHV4-61A0A0C4DH41 118 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 MUC21A0A0G2JKD1 596 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 A0A1W2PPM0 123 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 IGLV3-27P01718 113 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 IGHV4-59P01825 116 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 LINC00271P0C7V0 271 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 CSRP3P50461 194 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 SYNJ2BPP57105 145 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 LINC00313P59037 77 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 BRWD1-AS2P59051 145 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 HBBP68871 147 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 CDK5R1Q15078 307 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 C1orf100Q5SVJ3 147 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 XAF1Q6GPH4 301 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 PRNTQ86SH4 94 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 KMT2EQ8IZD2 1858 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 OR5C1Q8NGR4 320 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 OR2T35Q8NGX2 323 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 H1FXQ92522 213 aaKnown RBP4.93□□□□□ -1.62
COPS3-216ENST00000579716 TIMM17AQ99595 171 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 MSRB1Q9NZV6 116 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 MYH7BA7E2Y1 1941 aa4.93□□□□□ -1.62
COPS3-216ENST00000579716 PPRC1Q5VV67 1664 aaKnown RBP4.92□□□□□ -1.62
COPS3-216ENST00000579716 ADAMTS13Q76LX8 1427 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 ZNF860A6NHJ4 632 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 TMEM256-PLSCR3K7ERE1 68 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 SRP19P09132 144 aaKnown RBP4.92□□□□□ -1.62
COPS3-216ENST00000579716 HLA-DMBP28068 263 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 GNB2P62879 340 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 UBE2BP63146 152 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 FOXF1Q12946 379 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 UBE2SQ16763 222 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 TMEM155Q4W5P6 130 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 PHF5AQ7RTV0 110 aaKnown RBP4.92□□□□□ -1.62
COPS3-216ENST00000579716 C17orf82Q86X59 251 aaPredicted RBP4.92□□□□□ -1.62
COPS3-216ENST00000579716 ZNF843Q8N446 348 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 FAM57AQ8TBR7 257 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 TAF15Q92804 592 aaKnown RBP eCLIP4.92□□□□□ -1.62
COPS3-216ENST00000579716 PYGO2Q9BRQ0 406 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 TMEM243Q9BU79 118 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 TMEM242Q9NWH2 141 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 RAPGEF6Q8TEU7 1601 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 ATP7BP35670 1465 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 CFAP43Q8NDM7 1665 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 FNDC1Q4ZHG4 1894 aaPredicted RBP4.92□□□□□ -1.62
COPS3-216ENST00000579716 HMGXB3Q12766 1538 aa4.92□□□□□ -1.62
COPS3-216ENST00000579716 SUPT6HQ7KZ85 1726 aaKnown RBP4.92□□□□□ -1.62
COPS3-216ENST00000579716 TCHHQ07283 1943 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 TRBV24-1A0A075B6N3 115 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 IGLV5-45A0A087WSX0 123 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 GRIFINA4D1Z8 144 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 GNGT2O14610 69 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 IGHV4-39P01824 125 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 CXCL1P09341 107 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 IGLL1P15814 213 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 S100A4P26447 101 aaKnown RBP4.91□□□□□ -1.62
COPS3-216ENST00000579716 SNRPD3P62318 126 aaKnown RBP4.91□□□□□ -1.62
COPS3-216ENST00000579716 KIAA0087Q14695 138 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 RBMY1FQ15415 496 aaKnown RBP4.91□□□□□ -1.62
COPS3-216ENST00000579716 STPG1Q5TH74 334 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 CGB2Q6NT52 195 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 MDP1Q86V88 176 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 ZNF584Q8IVC4 421 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 NKAPP1Q8N9T2 125 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 NEXN-AS1Q8NBZ9 246 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 SMRP1Q8NCR6 262 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 MORN4Q8NDC4 146 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 OR8A1Q8NGG7 326 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 PPDPFLQ8WWR9 84 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 PRELID3AQ96N28 172 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 VGLL1Q99990 258 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 ZNF702PQ9H963 129 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 FER1L6Q2WGJ9 1857 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 ADGRB3O60242 1522 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 ARHGEF12Q9NZN5 1544 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 CFAP74Q9C0B2 1584 aa4.91□□□□□ -1.62
COPS3-216ENST00000579716 SBF2Q86WG5 1849 aa4.9□□□□□ -1.62
COPS3-216ENST00000579716 KIF13AQ9H1H9 1805 aa4.9□□□□□ -1.62
COPS3-216ENST00000579716 TRAV9-2A0A087WT02 112 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 IGKV1-8A0A0C4DH67 115 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 NXPH4O95158 308 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 HLA-DQA1P01909 254 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 PRSS1P07477 247 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 PRSS2P07478 247 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 POLR2IP36954 125 aaKnown RBP4.9□□□□□ -1.63
COPS3-216ENST00000579716 ZNF138P52744 262 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 LSM3P62310 102 aaKnown RBP4.9□□□□□ -1.63
COPS3-216ENST00000579716 RPL23P62829 140 aaKnown RBP4.9□□□□□ -1.63
COPS3-216ENST00000579716 CXCL6P80162 114 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 ZNF345Q14585 488 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 LINC00303Q3SY05 128 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 EBLN2Q6P2I7 272 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 LINC00173Q6ZV60 143 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 H2AFVQ71UI9 128 aa4.9□□□□□ -1.63
COPS3-216ENST00000579716 ZNF101Q8IZC7 436 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms