RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 C9orf170A2RU37 121 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 ST8SIA3O43173 380 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 OR4E1P0C645 316 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 SULT1A3P0DMM9 295 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 SULT1A4P0DMN0 295 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 SPP1P10451 314 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 C4BPBP20851 252 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 NPY1RP25929 384 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 HOXA1P49639 335 aaPredicted RBP9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 ERHP84090 104 aaKnown RBP9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 WT1-ASQ06250 92 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 LEMD1Q68G75 181 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 TRPT1Q86TN4 253 aaKnown RBP9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 LRTM2Q8N967 370 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 TMEM116Q8NCL8 245 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 CSNK1G2-AS1Q8NCQ2 148 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 COQ8AQ8NI60 647 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 NUDT15Q9NV35 164 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 PRR13Q9NZ81 148 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 TBC1D24Q9ULP9 559 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 FLVCR2Q9UPI3 526 aa9.89□□□□□ -0.83
CSNK1D-211ENST00000579316 TRAV2A0A0B4J234 112 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 DBX1A6NMT0 343 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 F8W735 103 aaPredicted RBP9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 ANXA7P20073 488 aaKnown RBP9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 SNCAP37840 140 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 FAM3BP58499 235 aaPredicted RBP9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 SPCS3P61009 180 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 PAFAH1B2P68402 229 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 DHRS2Q13268 280 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 SMCO1Q147U7 214 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 LYZL2Q7Z4W2 148 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 STHQ8IWL8 128 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 GBGT1Q8N5D6 347 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 OR52E5Q8NH55 327 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 GPR146Q96CH1 333 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 OR10C1Q96KK4 312 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 TMED3Q9Y3Q3 217 aa9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 F11RQ9Y624 299 aaKnown RBP9.88□□□□□ -0.83
CSNK1D-211ENST00000579316 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 TRAV6A0A075B6T7 132 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 A0A1B0GU03 582 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 CD5P06127 495 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 H2AFB2P0C5Z0 115 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 DEFB131AP59861 70 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 AARDQ4LEZ3 155 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 NMSQ5H8A3 153 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 SLC25A24Q6NUK1 477 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 SPATA12Q7Z6I5 190 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 C6orf223Q8N319 242 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 OR1P1Q8NH06 330 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 OR1S1Q8NH92 325 aa9.87□□□□□ -0.83
CSNK1D-211ENST00000579316 CEBPZOSA8MTT3 80 aa9.86□□□□□ -0.83
CSNK1D-211ENST00000579316 INS-IGF2F8WCM5 200 aa9.86□□□□□ -0.83
CSNK1D-211ENST00000579316 SLC25A6P12236 298 aa9.86□□□□□ -0.83
CSNK1D-211ENST00000579316 SUB1P53999 127 aaKnown RBP eCLIP9.86□□□□□ -0.83
CSNK1D-211ENST00000579316 SPINK9Q5DT21 86 aa9.86□□□□□ -0.83
CSNK1D-211ENST00000579316 ZNF114Q8NC26 417 aa9.86□□□□□ -0.83
CSNK1D-211ENST00000579316 C21orf62Q9NYP8 219 aa9.86□□□□□ -0.83
CSNK1D-211ENST00000579316 CORTO00230 105 aa9.85□□□□□ -0.83
CSNK1D-211ENST00000579316 HOXB5P09067 269 aa9.85□□□□□ -0.83
CSNK1D-211ENST00000579316 IFITM3Q01628 133 aa9.85□□□□□ -0.83
CSNK1D-211ENST00000579316 FAM24BQ8N5W8 94 aa9.85□□□□□ -0.83
CSNK1D-211ENST00000579316 MS4A6AQ9H2W1 248 aa9.85□□□□□ -0.83
CSNK1D-211ENST00000579316 HEYLQ9NQ87 328 aaPredicted RBP9.85□□□□□ -0.83
CSNK1D-211ENST00000579316 IGHV3-49A0A0A0MS15 119 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 NBDYA0A0U1RRE5 68 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 CTSGP08311 255 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 HTR2BP41595 481 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 GGNBP1Q5YKI7 109 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 TCF24Q7RTU0 167 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 SCARB1Q8WTV0 552 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 MITD1Q8WV92 249 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 MISP3Q96FF7 219 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 GPN1Q9HCN4 374 aaPredicted RBP9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 CLEC5AQ9NY25 188 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 HSPB7Q9UBY9 170 aa9.84□□□□□ -0.83
CSNK1D-211ENST00000579316 TRAV14DV4A0A0A6YYC5 116 aa9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 FAM90A26D6RGX4 464 aa9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 NUPL2O15504 423 aaKnown RBP9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 MED6O75586 246 aa9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 NXPH3O95157 252 aa9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 RELQ04864 619 aaPredicted RBP9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 NRARPQ7Z6K4 114 aa9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 NOXA1Q86UR1 476 aa9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 DUSP18Q8NEJ0 188 aa9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 ZNF431Q8TF32 576 aaPredicted RBP9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 VSIRQ9H7M9 311 aa9.83□□□□□ -0.84
CSNK1D-211ENST00000579316 K7EIM0 57 aa9.82□□□□□ -0.84
CSNK1D-211ENST00000579316 PRAF2O60831 178 aa9.82□□□□□ -0.84
CSNK1D-211ENST00000579316 ADAP1O75689 374 aa9.82□□□□□ -0.84
CSNK1D-211ENST00000579316 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
CSNK1D-211ENST00000579316 SLC24A4Q8NFF2 622 aa9.82□□□□□ -0.84
CSNK1D-211ENST00000579316 DTD1Q8TEA8 209 aa9.82□□□□□ -0.84
CSNK1D-211ENST00000579316 C18orf15Q96N68 181 aa9.82□□□□□ -0.84
CSNK1D-211ENST00000579316 IGHV3OR16-13A0A075B7E8 117 aa9.81□□□□□ -0.84
CSNK1D-211ENST00000579316 IGHV3-74A0A0B4J1X5 117 aa9.81□□□□□ -0.84
CSNK1D-211ENST00000579316 DNASE2O00115 360 aaPredicted RBP9.81□□□□□ -0.84
CSNK1D-211ENST00000579316 PITX3O75364 302 aa9.81□□□□□ -0.84
CSNK1D-211ENST00000579316 IL5P05113 134 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms