RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 PRR14LQ5THK1 2151 aa8.96□□□□□ -0.98
RNF43-203ENST00000577716 PTPRQQ9UMZ3 2332 aa8.96□□□□□ -0.98
RNF43-203ENST00000577716 IGHV3OR16-10A0A075B7F0 116 aa8.96□□□□□ -0.98
RNF43-203ENST00000577716 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.96□□□□□ -0.98
RNF43-203ENST00000577716 A0A1B0GW15 77 aa8.96□□□□□ -0.98
RNF43-203ENST00000577716 M0R381 172 aa8.96□□□□□ -0.98
RNF43-203ENST00000577716 IGLV3-1P01715 115 aa8.96□□□□□ -0.98
RNF43-203ENST00000577716 PRB4P10163 310 aaPredicted RBP8.96□□□□□ -0.98
RNF43-203ENST00000577716 NIT1Q86X76 327 aa8.96□□□□□ -0.98
RNF43-203ENST00000577716 PSG8Q9UQ74 426 aa8.96□□□□□ -0.98
RNF43-203ENST00000577716 NBR2O15453 112 aa8.95□□□□□ -0.98
RNF43-203ENST00000577716 IGHV2-5P01817 119 aa8.95□□□□□ -0.98
RNF43-203ENST00000577716 MLANAQ16655 118 aa8.95□□□□□ -0.98
RNF43-203ENST00000577716 PRR31Q5SQ13 230 aa8.95□□□□□ -0.98
RNF43-203ENST00000577716 A6NNC1 897 aa8.95□□□□□ -0.98
RNF43-203ENST00000577716 TMPRSS3P57727 454 aa8.95□□□□□ -0.98
RNF43-203ENST00000577716 HIST1H1AQ02539 215 aaPredicted RBP8.95□□□□□ -0.98
RNF43-203ENST00000577716 FAM53AQ6NSI3 398 aaPredicted RBP8.95□□□□□ -0.98
RNF43-203ENST00000577716 H7C2G1 150 aa8.95□□□□□ -0.98
RNF43-203ENST00000577716 COL4A4P53420 1690 aaPredicted RBP8.94□□□□□ -0.98
RNF43-203ENST00000577716 LY6G6EA0A0G2JKS1 128 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 ZNF726P1Q15940 193 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 LCN12Q6JVE5 192 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 CRIM1Q9NZV1 1036 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 U3KQA8 63 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 IGKV3-15P01624 115 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 NUTF2P61970 127 aaKnown RBP8.94□□□□□ -0.98
RNF43-203ENST00000577716 PVRIGQ6DKI7 326 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 KIR3DL3Q8N743 410 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 FAM208BQ5VWN6 2430 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 ACACBO00763 2458 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 PRSS2P07478 247 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 FAM74A4Q5TZK3 123 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 LY96Q9Y6Y9 160 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 A0A1B0GUS0 222 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 TIMM23O14925 209 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 TRGV3P03979 118 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 CYYR1Q96J86 154 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 FOXC2Q99958 501 aa8.94□□□□□ -0.98
RNF43-203ENST00000577716 ZNF503-AS2A6NEH8 195 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 IGKV1-16P04430 117 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 SMIM13P0DJ93 91 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 FAM106AQ4KMX7 169 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 LYPD6Q86Y78 171 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 C8orf46Q8TAG6 207 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 TMEM167AQ8TBQ9 72 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 DYNLRB2Q8TF09 96 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 FABP5P3A8MUU1 101 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 ATP5LO75964 103 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 C3orf79P0CE67 100 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 PSG1P11464 419 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 PRSS8Q16651 343 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 TMEM200BQ69YZ2 307 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 ATP5L2Q7Z4Y8 100 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 PMS2P5A8MQ11 134 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.93□□□□□ -0.98
RNF43-203ENST00000577716 LMO1P25800 156 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 TTC9CQ8N5M4 171 aa8.93□□□□□ -0.98
RNF43-203ENST00000577716 NUP210Q8TEM1 1887 aaPredicted RBP8.92□□□□□ -0.98
RNF43-203ENST00000577716 CLEC19AQ6UXS0 136 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 EXOC3-AS1Q8N2X6 119 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 ARL6IP6Q8N6S5 226 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 LINC00479Q96M42 142 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 KIR2DL4Q99706 377 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 C2orf88Q9BSF0 95 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 KIF26AQ9ULI4 1882 aaPredicted RBP8.92□□□□□ -0.98
RNF43-203ENST00000577716 SRSF6Q13247 344 aaKnown RBP8.92□□□□□ -0.98
RNF43-203ENST00000577716 SYT8Q8NBV8 401 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 ALKBH7Q9BT30 221 aaPredicted RBP8.92□□□□□ -0.98
RNF43-203ENST00000577716 IGKV3-20P01619 116 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 RNASE2P10153 161 aaKnown RBP8.92□□□□□ -0.98
RNF43-203ENST00000577716 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 WDR86Q86TI4 376 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 HAPLN4Q86UW8 402 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 SCRT1Q9BWW7 348 aa8.92□□□□□ -0.98
RNF43-203ENST00000577716 SNCGO76070 127 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 IGHG3P01860 377 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 IGHV2-70P01814 119 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 TCRAP04437 139 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 SFTPCP11686 197 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 NUP35Q8NFH5 326 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 NEU4Q8WWR8 484 aaPredicted RBP8.91□□□□□ -0.98
RNF43-203ENST00000577716 TRAV8-1A0A0A6YYK1 113 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 A8MWP6 167 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 H0YJW9 148 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 IGHV1-8P0DP01 117 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 PPIFP30405 207 aaKnown RBP8.91□□□□□ -0.98
RNF43-203ENST00000577716 CACNG7P62955 275 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 SLC25A48Q6ZT89 311 aaKnown RBP8.91□□□□□ -0.98
RNF43-203ENST00000577716 LURAP1LQ8IV03 231 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 LYPD6BQ8NI32 183 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 TNFRSF14Q92956 283 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 GAFA1Q96PS6 74 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 RAXQ9Y2V3 346 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 TMEM178BH3BS89 294 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 DLEU1O43261 78 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 HBDP02042 147 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 ERVK11-1P61568 191 aa8.91□□□□□ -0.98
RNF43-203ENST00000577716 CHCHD1Q96BP2 118 aaKnown RBP8.91□□□□□ -0.98
RNF43-203ENST00000577716 KIAA1671Q9BY89 1806 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms