RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 A0A0D9SG52 128 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 TMEM256-PLSCR3K7ERE1 68 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 TAX1BP3O14907 124 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 ATP5HO75947 161 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 UBL3O95164 117 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 IGLV1-51P01701 117 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 PPIBP23284 216 aaKnown RBP0.39□□□□□ -2.35
TOP2A-202ENST00000577541 ERP29P30040 261 aaKnown RBP0.39□□□□□ -2.35
TOP2A-202ENST00000577541 BRS3P32247 399 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 PPP1R2P41236 205 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 RHOBP62745 196 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 ESRGQ1W209 222 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 C1orf137Q5JT78 98 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 HACD4Q5VWC8 232 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 PPP1R2P3Q6NXS1 205 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 DHRS4L2Q6PKH6 230 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 DPPA3Q6W0C5 159 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 GOLT1AQ6ZVE7 132 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 CLECL1Q8IZS7 167 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 OR11H6Q8NGC7 330 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 OR4D11Q8NGI4 311 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 HOPXQ9BPY8 73 aaPredicted RBP0.39□□□□□ -2.35
TOP2A-202ENST00000577541 PRADC1Q9BSG0 188 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 ASB4Q9Y574 426 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 E9PCH4 1651 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 SBF1O95248 1867 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 MCM3APO60318 1980 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 NOTCH1P46531 2555 aa0.39□□□□□ -2.35
TOP2A-202ENST00000577541 MACF1Q9UPN3 7388 aaKnown RBP0.39□□□□□ -2.35
TOP2A-202ENST00000577541 ARHGEF11O15085 1522 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 CEP192Q8TEP8 1941 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 EXPH5Q8NEV8 1989 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 COL1A1P02452 1464 aaPredicted RBP0.38□□□□□ -2.35
TOP2A-202ENST00000577541 CEP164Q9UPV0 1460 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 IGKV2-40A0A087WW87 121 aaPredicted RBP0.38□□□□□ -2.35
TOP2A-202ENST00000577541 LOC110117498A0A087WWA1 95 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 K7ERJ3 54 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 GEMIN2O14893 280 aaKnown RBP0.38□□□□□ -2.35
TOP2A-202ENST00000577541 SULT1B1O43704 296 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 MFSD11O43934 449 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 TIMM17BO60830 172 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 OR2B3O76000 313 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 IGKV2D-40P01614 121 aaPredicted RBP0.38□□□□□ -2.35
TOP2A-202ENST00000577541 ZNF25P17030 456 aaPredicted RBP0.38□□□□□ -2.35
TOP2A-202ENST00000577541 S100A4P26447 101 aaKnown RBP0.38□□□□□ -2.35
TOP2A-202ENST00000577541 ROMO1P60602 79 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 MRPS15P82914 257 aaKnown RBP0.38□□□□□ -2.35
TOP2A-202ENST00000577541 RHOGP84095 191 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 PLCXD2Q0VAA5 305 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 RRN3P1Q2M238 152 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 PATE2Q6UY27 113 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 PDZD9Q8IXQ8 264 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 SMIM20Q8N5G0 67 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 LINC00301Q8NCQ3 95 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 SLC30A7Q8NEW0 376 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 PXT1Q8NFP0 134 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 Q8TAT8 98 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 CHMP6Q96FZ7 201 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 C2orf50Q96LR7 162 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 SERPINI1Q99574 410 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 PARVBQ9HBI1 364 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 CDC42SE1Q9NRR8 79 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 TVP23BQ9NYZ1 205 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 SOX21Q9Y651 276 aaPredicted RBP0.38□□□□□ -2.35
TOP2A-202ENST00000577541 MED12LQ86YW9 2145 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 KIF1BO60333 1816 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 ALPK2Q86TB3 2170 aa0.38□□□□□ -2.35
TOP2A-202ENST00000577541 FBN2P35556 2912 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 ADGRB2O60241 1585 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 FRMPD1Q5SYB0 1578 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 RTL1A6NKG5 1358 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 MYH7BA7E2Y1 1941 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 TRBV19A0A075B6N1 114 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 ODAMA1E959 279 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 CCDC160A6NGH7 325 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 ZNF736B4DX44 427 aaPredicted RBP0.37□□□□□ -2.35
TOP2A-202ENST00000577541 J3QRK9 145 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 CSN2P05814 226 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 CRHP06850 196 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 CXCL1P09341 107 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 G0S2P27469 103 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 YPEL3P61236 119 aaPredicted RBP0.37□□□□□ -2.35
TOP2A-202ENST00000577541 NCALDP61601 193 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 HSPE1P61604 102 aaKnown RBP0.37□□□□□ -2.35
TOP2A-202ENST00000577541 GNG5P63218 68 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 SPANXN5Q5MJ07 72 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 C1orf134Q5TEV5 83 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 LYG2Q86SG7 212 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 TRAPPC6BQ86SZ2 158 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 PHF13Q86YI8 300 aaPredicted RBP0.37□□□□□ -2.35
TOP2A-202ENST00000577541 GNPDA2Q8TDQ7 276 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 SFT2D1Q8WV19 159 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 PATE1Q8WXA2 126 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 CARD19Q96LW7 228 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 GGACTQ9BVM4 153 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 TRABDQ9H4I3 376 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 RNF122Q9H9V4 155 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 MED9Q9NWA0 146 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 TAS2R7Q9NYW3 318 aa0.37□□□□□ -2.35
TOP2A-202ENST00000577541 OR5AC2Q9NZP5 309 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms