RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 COMMD9Q9P000 198 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 RBM12B-AS1Q9P1G2 102 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 AK3Q9UIJ7 227 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 OARD1Q9Y530 152 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 MROH1Q8NDA8 1641 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 MYO5CQ9NQX4 1742 aa2.19□□□□□ -2.06
SMCHD1-202ENST00000577300 LAMB4A4D0S4 1761 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 TECPR2O15040 1411 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 TNS2Q63HR2 1409 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 TANC1Q9C0D5 1861 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 EFCAB5A4FU69 1503 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 IQGAP3Q86VI3 1631 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ABCA6Q8N139 1617 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 COL22A1Q8NFW1 1626 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ABCA3Q99758 1704 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 MUC21A0A140T8X8 626 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 TEX50A0A1B0GTY4 177 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 TRDV1A0A1B0GX56 115 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 A0A1B0GXF2 115 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 MEIS3P1A6NDR6 274 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 OOSP1A8MZH6 123 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM250H0YL14 139 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 H7C1H1 209 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 M0R129 80 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ARL6IP5O75915 188 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 DPM2O94777 84 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 IL5P05113 134 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 SLC25A5P05141 298 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 LINC00869P0C866 280 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 P0DMU3 169 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 FAM231AP0DMU4 169 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 FAM231CP0DMU5 169 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 SLC25A4P12235 298 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 PRSS3P35030 304 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 LPAR6P43657 344 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 P2RX1P51575 399 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 PLGLB1Q02325 96 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 HES1Q14469 280 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 WFDC2Q14508 124 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ADIRFQ15847 76 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 DEFB116Q30KQ4 102 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 KRTAP13-2Q52LG2 175 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 SPRNQ5BIV9 151 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 SLC25A34Q6PIV7 304 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 AMTNQ6UX39 209 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 DPPA3Q6W0C5 159 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM91Q6ZNR0 172 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 Q6ZRU5 148 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 LINC00311Q8N616 119 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ZFP62Q8NB50 900 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 OR4X2Q8NGF9 303 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 OR4K13Q8NH42 304 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ATP6V0E2Q8NHE4 81 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 OTOSQ8NHW6 89 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 LMX1AQ8TE12 382 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM158Q8WZ71 300 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 FGF11Q92914 225 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 MAL2Q969L2 176 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 EEF1AKMT3Q96AZ1 226 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 S100A16Q96FQ6 103 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 LINC00526Q96FQ7 95 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 AP1S3Q96PC3 154 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 TMEM147Q9BVK8 224 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 SLC25A22Q9H936 323 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 NDUFB11Q9NX14 153 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 WRAP73Q9P2S5 460 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 OR5V1Q9UGF6 321 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 RPUSD1Q9UJJ7 312 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ASF1AQ9Y294 204 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF257Q9Y2Q1 563 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 KLK5Q9Y337 293 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 HEBP2Q9Y5Z4 205 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 CHD3Q12873 2000 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 UNC13BO14795 1591 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 DIP2CQ9Y2E4 1556 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ZNF142P52746 1687 aaPredicted RBP2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 LTN1O94822 1766 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 ADAMTSL1Q8N6G6 1762 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 OTOFQ9HC10 1997 aa2.18□□□□□ -2.06
SMCHD1-202ENST00000577300 CRB1P82279 1406 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 RNF17Q9BXT8 1623 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 POLR1AO95602 1720 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 ARAP2Q8WZ64 1704 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 KIF20BQ96Q89 1820 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 hCG_1818297A0A087WSY0 165 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 TRAV14DV4A0A0A6YYC5 116 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 TRAV4A0A0B4J268 109 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 A0A1B0GWB2 263 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 A0A1W2PPM0 123 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 KANTRA0A1W2PQU2 76 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 GRIFINA4D1Z8 144 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 C5orf49A4QMS7 147 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 IZUMO1RA6ND01 250 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 ARRDC5A6NEK1 342 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 A8MT66 165 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 SNRPGP15A8MWD9 76 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 GABARAPH6UMI1 98 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 M0R2P5 195 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 FCN1O00602 326 aa2.17□□□□□ -2.06
SMCHD1-202ENST00000577300 NUPR1O60356 82 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms