RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SPANXN5Q5MJ07 72 aa7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 SPSB3Q6PJ21 355 aa7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 SLC16A13Q7RTY0 426 aa7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 TMEM61Q8N0U2 210 aa7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 TMEM116Q8NCL8 245 aa7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 ACY3Q96HD9 319 aa7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 C20orf24Q9BUV8 137 aa7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 ELOVL1Q9BW60 279 aa7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 GPR61Q9BZJ8 451 aa7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 ZNF256Q9Y2P7 627 aaPredicted RBP7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 LSM4Q9Y4Z0 139 aaKnown RBP7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 PUS1Q9Y606 427 aaKnown RBP eCLIP7.11□□□□□ -1.27
NPLOC4-219ENST00000576713 PIGBOS1A0A0B4J2F0 54 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 KRTAP9-7A8MTY7 169 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 SNRPGP15A8MWD9 76 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 GOSR2O14653 212 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 NUPL2O15504 423 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 SCAF4O95104 1147 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 IFNA4P05014 189 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 GP9P14770 177 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 NPBWR1P48145 328 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 ZNF90Q03938 601 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 TATDN3Q17R31 274 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 MRAPQ8TCY5 172 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 C2orf50Q96LR7 162 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 KRTAP9-9Q9BYP9 154 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 KRTAP9-4Q9BYQ2 154 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 WFDC10AQ9H1F0 79 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 PSENENQ9NZ42 101 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 PEMTQ9UBM1 199 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 CACFD1Q9UGQ2 172 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 PAIP2BQ9ULR5 123 aaKnown RBP7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 ALG5Q9Y673 324 aa7.1□□□□□ -1.27
NPLOC4-219ENST00000576713 IGHV3-66A0A0C4DH42 116 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 C5orf51A6NDU8 294 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 MED6O75586 246 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 YIF1AO95070 293 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 PTTG1O95997 202 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 OR10J1P30954 320 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 RAB32Q13637 225 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 USF2Q15853 346 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 TMEM14EPQ6UXP3 125 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 GSG1LQ6UXU4 331 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 ZNF600Q6ZNG1 722 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 TMEM182Q6ZP80 229 aaPredicted RBP7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 ACOT7LQ6ZUV0 252 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 SMIM8Q96KF7 97 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 DAZ1Q9NQZ3 744 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 UFC1Q9Y3C8 167 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 LSM5Q9Y4Y9 91 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 TENM3Q9P273 2699 aa7.09□□□□□ -1.27
NPLOC4-219ENST00000576713 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.28
NPLOC4-219ENST00000576713 IGHV7-4-1A0A0J9YVY3 117 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 RPS10-NUDT3A0A1W2PQS6 291 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 H0YIZ8 118 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 K7EMT4 169 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 CHEK1O14757 476 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 PRAF2O60831 178 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 CD7P09564 240 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 METTL15P1P0C7V9 234 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 SLC25A4P12235 298 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 CXCL3P19876 107 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 GPX4P36969 197 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 ELLP55199 621 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 RELQ04864 619 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 OR8G2PQ6IF36 304 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 CIB3Q96Q77 187 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 RNF2Q99496 336 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 GPN1Q9HCN4 374 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 GAR1Q9NY12 217 aaKnown RBP7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 OR5AC2Q9NZP5 309 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 MRPL27Q9P0M9 148 aaKnown RBP7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 SMPXQ9UHP9 88 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 STRAPQ9Y3F4 350 aaKnown RBP7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 NBEAL2Q6ZNJ1 2754 aa7.08□□□□□ -1.28
NPLOC4-219ENST00000576713 IGSF23A1L1A6 192 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 FAM24AA6NFZ4 105 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 PSG1P11464 419 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 GATA2P23769 480 aaPredicted RBP7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 S100A10P60903 97 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 RRAS2P62070 204 aaPredicted RBP7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 DEFB121Q5J5C9 76 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 FAM90A2PQ658T7 463 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 LCN12Q6JVE5 192 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 THAP8Q8NA92 274 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 OR11H7Q8NGC8 314 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 OR1S2Q8NGQ3 325 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 DYNLRB2Q8TF09 96 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 RHPN1-AS1Q9BWJ2 59 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 PALMDQ9NP74 551 aa7.07□□□□□ -1.28
NPLOC4-219ENST00000576713 TRAV14DV4A0A0A6YYC5 116 aa7.06□□□□□ -1.28
NPLOC4-219ENST00000576713 TSC22D2O75157 780 aa7.06□□□□□ -1.28
NPLOC4-219ENST00000576713 TOMM40O96008 361 aa7.06□□□□□ -1.28
NPLOC4-219ENST00000576713 ATP5IP56385 69 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-219ENST00000576713 TAS2R30P59541 319 aa7.06□□□□□ -1.28
NPLOC4-219ENST00000576713 YPEL3P61236 119 aaPredicted RBP7.06□□□□□ -1.28
NPLOC4-219ENST00000576713 RAB11AP62491 216 aa7.06□□□□□ -1.28
NPLOC4-219ENST00000576713 DCTN2Q13561 401 aaKnown RBP7.06□□□□□ -1.28
NPLOC4-219ENST00000576713 OR2F1Q13607 317 aa7.06□□□□□ -1.28
NPLOC4-219ENST00000576713 OXA1LQ15070 435 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms