RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 B4DSR2 109 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 K7EIM0 57 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 FCN1O00602 326 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 PEX7O00628 323 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 NDUFB8O95169 186 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 IGHV1-69P01742 117 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 MT-ND6P03923 174 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 SMIM6P0DI80 62 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 PSG1P11464 419 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 NPPCP23582 126 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 S100A2P29034 98 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 MFAP2P55001 183 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 SNRPEP62304 92 aaKnown RBP5.39□□□□□ -1.55
SMG6-217ENST00000575338 SSBP2P81877 361 aaPredicted RBP5.39□□□□□ -1.55
SMG6-217ENST00000575338 FABP9Q0Z7S8 132 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 PDE6HQ13956 83 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 TMEM183BQ1AE95 376 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 RPEL1Q2QD12 228 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 KLK9Q2XQG4 91 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 Q56UQ5 140 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 CENPWQ5EE01 88 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 LDLRAD2Q5SZI1 272 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 WDR73Q6P4I2 378 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 PATE2Q6UY27 113 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 FAM231DQ6ZW35 169 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 OR5T1Q8NG75 326 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 OCC1Q8TAD7 63 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 FAM110DQ8TAY7 271 aaPredicted RBP5.39□□□□□ -1.55
SMG6-217ENST00000575338 CMTM2Q8TAZ6 248 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 FXYD5Q96DB9 178 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 RNF125Q96EQ8 232 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 ZNF503Q96F45 646 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 FMC1Q96HJ9 113 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 ATG101Q9BSB4 218 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 SLC25A39Q9BZJ4 359 aaPredicted RBP5.39□□□□□ -1.55
SMG6-217ENST00000575338 MEGF9Q9H1U4 602 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 OTORQ9NRC9 128 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 KLK9Q9UKQ9 250 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 PLXNB1O43157 2135 aa5.39□□□□□ -1.55
SMG6-217ENST00000575338 TRBV7-1A0A0A6YYK4 115 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 A0A0U1RQK1 487 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 CENPVL3A0A0U1RRI6 287 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 ZNF320A2RRD8 509 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 GGTLC3B5MD39 225 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 H3BUA1 57 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 J3QLI3 93 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 BMPR1BO00238 502 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 GCGP01275 180 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 TRGC2P03986 189 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 IL4P05112 153 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 SLC25A5P05141 298 aaKnown RBP5.38□□□□□ -1.55
SMG6-217ENST00000575338 MSMBP08118 114 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 APELAP0DMC3 54 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 RPL7P18124 248 aaKnown RBP5.38□□□□□ -1.55
SMG6-217ENST00000575338 CDX1P47902 265 aaPredicted RBP5.38□□□□□ -1.55
SMG6-217ENST00000575338 MEOX2P50222 304 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 PSG9Q00887 426 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 PRB3Q04118 309 aaPredicted RBP5.38□□□□□ -1.55
SMG6-217ENST00000575338 FAM209BQ5JX69 171 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 IBA57Q5T440 356 aaKnown RBP5.38□□□□□ -1.55
SMG6-217ENST00000575338 RASL11AQ6T310 242 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 UNQ5815/PRO19632Q6UWF5 114 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 ZNF329Q86UD4 541 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 Q8N9W7 124 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 NECAP1Q8NC96 275 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 GPR82Q96P67 336 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 SHANK2-AS3Q9BTD1 123 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 DERL1Q9BUN8 251 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 TMUB1Q9BVT8 246 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 AAMDCQ9H7C9 122 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 MRPL27Q9P0M9 148 aaKnown RBP5.38□□□□□ -1.55
SMG6-217ENST00000575338 EPDR1Q9UM22 224 aa5.38□□□□□ -1.55
SMG6-217ENST00000575338 ADGRG4Q8IZF6 3080 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 TRBV20OR9-2A0A075B6H5 130 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 IGHV7-81A0A0B4J1V7 117 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 TRAV5A0A0B4J249 113 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 TRBV6-1A0A0K0K1D8 114 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 WI2-2373I1.2A0A1W2PRP0 233 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 PGPA6NDG6 321 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 FAM223BA6NKX1 122 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 H3BRN7 92 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 IGHV3-48P01763 117 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 TRGC1P0CF51 173 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 PYYP10082 97 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 MGST1P10620 155 aaKnown RBP5.37□□□□□ -1.55
SMG6-217ENST00000575338 GP9P14770 177 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 HOXA5P20719 270 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 CSN1S1P47710 185 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 CRIP2P52943 208 aaPredicted RBP5.37□□□□□ -1.55
SMG6-217ENST00000575338 NDUFA6P56556 154 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 RANP62826 216 aaKnown RBP5.37□□□□□ -1.55
SMG6-217ENST00000575338 RELQ04864 619 aaPredicted RBP5.37□□□□□ -1.55
SMG6-217ENST00000575338 SMUG1Q53HV7 270 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 ZNF600Q6ZNG1 722 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 BAGE2Q86Y30 109 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 FAM223AQ8IWN6 122 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 LINC00518Q8N0U6 118 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 TEX29Q8N6K0 151 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 EEF1AKMT3Q96AZ1 226 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 DAZAP1Q96EP5 407 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms