RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 C3orf22Q8N5N4 141 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 OR4C13Q8NGP0 309 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 BAALCQ8WXS3 180 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 ST8SIA1Q92185 356 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 TM4SF19Q96DZ7 209 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 AJUBAQ96IF1 538 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 GFRA4Q9GZZ7 299 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 C21orf62Q9NYP8 219 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 PRO0628Q9UI54 55 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 PROCRQ9UNN8 238 aa6.48□□□□□ -1.37
TOM1L1-220ENST00000575333 FOXS1O43638 330 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 IGLV2-8P01709 118 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 CISD3P0C7P0 127 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 SCGB1C2P0DMR2 95 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 MALP21145 153 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 MS4A18Q3C1V0 323 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 ZDHHC23Q8IYP9 409 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 SLC22A18ASQ8N1D0 253 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 Q8N7P7 452 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 FLYWCH2Q96CP2 140 aaKnown RBP6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 ZNF414Q96IQ9 312 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 CCL28Q9NRJ3 127 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 TCF19Q9Y242 345 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 MYO9BQ13459 2157 aa6.47□□□□□ -1.37
TOM1L1-220ENST00000575333 IGKV1-5P01602 117 aa6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 HHEXQ03014 270 aa6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 C1orf61Q13536 156 aa6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 CST6Q15828 149 aa6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 CIARTQ8N365 385 aaPredicted RBP6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 C10orf126Q8N4M7 172 aa6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 LINC00526Q96FQ7 95 aa6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 SPRY4Q9C004 299 aa6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 ZNF442Q9H7R0 627 aa6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 F11RQ9Y624 299 aaKnown RBP6.46□□□□□ -1.37
TOM1L1-220ENST00000575333 PCSK5Q92824 1860 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 FREM3P0C091 2139 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 ARHGAP21Q5T5U3 1957 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 TRBV25-1A0A075B6N4 114 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 IGKV1D-13A0A0B4J2D9 117 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 TRBV7-7A0A0K0K1E9 115 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 EPOPA6NHQ4 379 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 NPIPB11E5RHQ5 1161 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 RRHO14718 337 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 CHEK1O14757 476 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 ZIC3O60481 467 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 LINC00271P0C7V0 271 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 CECR9P0C854 216 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 IGKV1-13P0DP09 117 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 CAMPP49913 170 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 EDDM3BP56851 147 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 HERVK_113P63121 156 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 PCP2Q8IVA1 136 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 WFDC5Q8TCV5 224 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 MYOZ3Q8TDC0 251 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 CFHR4Q92496 578 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 BMFQ96LC9 184 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 FZR1Q9UM11 496 aa6.46□□□□□ -1.38
TOM1L1-220ENST00000575333 PRUNE2Q8WUY3 3088 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 TCF20Q9UGU0 1960 aaKnown RBP6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 LOC107984640A0A0U1RRK4 108 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 A0A1W2PQF6 199 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 IGKV1-39P01597 117 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 IGKV1D-39P04432 117 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 IGLC6P0CF74 106 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 KLF17Q5JT82 389 aaPredicted RBP6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 ASCL5Q7RTU5 278 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 PDPNQ86YL7 162 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 SHISA5Q8N114 240 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 DEFB123Q8N688 67 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 TMEM116Q8NCL8 245 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 SLC37A2Q8TED4 501 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 SNRNP40Q96DI7 357 aaKnown RBP6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 RNF125Q96EQ8 232 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 RITA1Q96K30 269 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 LINC01600Q96MT4 127 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 MCRIP2Q9BUT9 160 aaKnown RBP6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 C7orf69Q9H7B7 122 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 XIRP2A4UGR9 3374 aa6.45□□□□□ -1.38
TOM1L1-220ENST00000575333 COL6A3P12111 3177 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 TRAV8-2A0A0B4J237 113 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 FAM240AA0A1B0GVK7 77 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 J3QLI3 93 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 PRRG2O14669 202 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 CLDN14O95500 239 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 NCR2O95944 276 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 CT62P0C5K7 136 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 UBE2D3P61077 147 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 UBE2D2P62837 147 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 CACNG7P62955 275 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 BCORP1Q8N888 145 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 ZNF355PQ9NSJ1 428 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 RAXQ9Y2V3 346 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 ADAMTS9Q9P2N4 1935 aa6.44□□□□□ -1.38
TOM1L1-220ENST00000575333 TRBV6-6A0A0A6YYG2 114 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 C5orf67F2Z3F1 127 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 HOXA3O43365 443 aaPredicted RBP6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 GP1BBP13224 206 aa6.43□□□□□ -1.38
TOM1L1-220ENST00000575333 MYF5P13349 255 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms