RNA–Protein interactions for RNA: ENST00000570359.1

VPS53-206, Transcript of VPS53, GARP complex subunit, humanhuman

Gene VPS53, Length 2,781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-206ENST00000570359 CA1P00915 261 aaPredicted RBP7.92□□□□□ -1.14
VPS53-206ENST00000570359 GNG4P50150 75 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 ZNF137PP52743 207 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 GAGE1Q13065 139 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 JOSD1Q15040 202 aaPredicted RBP7.92□□□□□ -1.14
VPS53-206ENST00000570359 OR4A5Q8NH83 315 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 PAXXQ9BUH6 204 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 DPM3Q9P2X0 92 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 TCRBV4S1A1TA0A5B7 111 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 HELTA6NFD8 242 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 PRB1P04280 392 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 FRMD6-AS1P0C7T7 363 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 FAM71F2Q6NXP2 309 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 C22orf15Q8WYQ4 148 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 IMMP2LQ96T52 175 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 WNT10AQ9GZT5 417 aa7.92□□□□□ -1.14
VPS53-206ENST00000570359 USP9YO00507 2555 aaPredicted RBP7.91□□□□□ -1.14
VPS53-206ENST00000570359 USF2Q15853 346 aaPredicted RBP7.91□□□□□ -1.14
VPS53-206ENST00000570359 TIGITQ495A1 244 aa7.91□□□□□ -1.14
VPS53-206ENST00000570359 KCNIP4Q6PIL6 250 aa7.91□□□□□ -1.14
VPS53-206ENST00000570359 MRPL52Q86TS9 123 aaKnown RBP7.91□□□□□ -1.14
VPS53-206ENST00000570359 TEX45Q8NA69 505 aa7.91□□□□□ -1.14
VPS53-206ENST00000570359 OR10G8Q8NGN5 311 aa7.91□□□□□ -1.14
VPS53-206ENST00000570359 PRO1933Q9H354 126 aa7.91□□□□□ -1.14
VPS53-206ENST00000570359 TEX22C9J3V5 150 aa7.91□□□□□ -1.14
VPS53-206ENST00000570359 BPIFB3P59826 476 aa7.91□□□□□ -1.14
VPS53-206ENST00000570359 CACNG8Q8WXS5 425 aa7.91□□□□□ -1.14
VPS53-206ENST00000570359 PACRGQ96M98 296 aaPredicted RBP7.91□□□□□ -1.14
VPS53-206ENST00000570359 TMEM167BQ9NRX6 74 aa7.91□□□□□ -1.14
VPS53-206ENST00000570359 USP24Q9UPU5 2620 aa7.9□□□□□ -1.14
VPS53-206ENST00000570359 LINC00614P0C842 121 aa7.9□□□□□ -1.14
VPS53-206ENST00000570359 PCP4P48539 62 aa7.9□□□□□ -1.14
VPS53-206ENST00000570359 PMS2P11Q13670 270 aa7.9□□□□□ -1.14
VPS53-206ENST00000570359 C8orf31Q8N9H6 132 aa7.9□□□□□ -1.14
VPS53-206ENST00000570359 NEU4Q8WWR8 484 aaPredicted RBP7.9□□□□□ -1.14
VPS53-206ENST00000570359 NRGNQ92686 78 aa7.9□□□□□ -1.14
VPS53-206ENST00000570359 ANAPC16Q96DE5 110 aa7.9□□□□□ -1.14
VPS53-206ENST00000570359 TRBV24-1A0A075B6N3 115 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 XKRY2A2RUG3 117 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 NBR2O15453 112 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 CBLN1P23435 193 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 FAM120AOSQ5T036 256 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 TEX38Q6PEX7 206 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 TNFRSF14Q92956 283 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 EAF1Q96JC9 268 aaPredicted RBP7.9□□□□□ -1.15
VPS53-206ENST00000570359 FAM167A-AS1Q96KT0 104 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 TMEM242Q9NWH2 141 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 ABCA12Q86UK0 2595 aa7.9□□□□□ -1.15
VPS53-206ENST00000570359 GRIFINA4D1Z8 144 aa7.89□□□□□ -1.15
VPS53-206ENST00000570359 HIST1H2BLQ99880 126 aa7.89□□□□□ -1.15
VPS53-206ENST00000570359 PITPNC1Q9UKF7 332 aa7.89□□□□□ -1.15
VPS53-206ENST00000570359 F11RQ9Y624 299 aaKnown RBP7.89□□□□□ -1.15
VPS53-206ENST00000570359 ABCA2Q9BZC7 2435 aa7.89□□□□□ -1.15
VPS53-206ENST00000570359 SLC25A5P05141 298 aaKnown RBP7.89□□□□□ -1.15
VPS53-206ENST00000570359 OR8I2Q8N0Y5 310 aa7.89□□□□□ -1.15
VPS53-206ENST00000570359 LY6G5BQ8NDX9 201 aa7.89□□□□□ -1.15
VPS53-206ENST00000570359 TRAPPC1Q9Y5R8 145 aa7.89□□□□□ -1.15
VPS53-206ENST00000570359 LY6LH3BQJ8 138 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 GCGP01275 180 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 CRYGBP07316 175 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 PSG1P11464 419 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 CEACAM3P40198 252 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 OR1L4Q8NGR5 311 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 RASL11BQ9BPW5 248 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 SRD5A3Q9H8P0 318 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 DOPEY1Q5JWR5 2465 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 FNDC10F2Z333 226 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 GZMBP10144 247 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 HOXB4P17483 251 aaPredicted RBP7.88□□□□□ -1.15
VPS53-206ENST00000570359 NDPQ00604 133 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 ECSCRQ19T08 205 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 MRPL54Q6P161 138 aaKnown RBP7.88□□□□□ -1.15
VPS53-206ENST00000570359 MRPL41Q8IXM3 137 aaKnown RBP7.88□□□□□ -1.15
VPS53-206ENST00000570359 BCL6BQ8N143 479 aaPredicted RBP7.88□□□□□ -1.15
VPS53-206ENST00000570359 ZNF664Q8N3J9 261 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 OR1P1Q8NH06 330 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 PSMB11A5LHX3 300 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 PGPA6NDG6 321 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 PHOX2AO14813 284 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 HYPMO75409 117 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 TMEM11P17152 192 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 PRTN3P24158 256 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 IER3P46695 156 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 ETFRF1Q6IPR1 90 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 TMEM183AQ8IXX5 376 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 C8orf46Q8TAG6 207 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 LINC00527Q9UJ94 153 aa7.88□□□□□ -1.15
VPS53-206ENST00000570359 M0QZK8 103 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 ISLRO14498 428 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 GGCTO75223 188 aaKnown RBP7.87□□□□□ -1.15
VPS53-206ENST00000570359 CX3CL1P78423 397 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 KIAA1644Q3SXP7 199 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 BRD3OSQ6XYD6 125 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 Q71RC1 249 aaPredicted RBP7.87□□□□□ -1.15
VPS53-206ENST00000570359 DTX2Q86UW9 622 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 TMEM219Q86XT9 240 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 CFHR4Q92496 578 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 TRAV8-1A0A0A6YYK1 113 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 M0R143 59 aa7.87□□□□□ -1.15
VPS53-206ENST00000570359 EREGO14944 169 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms