RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 G6PCP35575 357 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 SUB1P53999 127 aaKnown RBP eCLIP5.4□□□□□ -1.55
SMG1-217ENST00000569764 DLX1P56177 255 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 TAS2R20P59543 309 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 UNC119Q13432 240 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 RTL8BQ17RB0 113 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 ZIC4Q8N9L1 334 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 AJUBAQ96IF1 538 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 DCHS2Q6V1P9 2916 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 DEFB108AA8MXU0 73 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 IQCF6A8MYZ5 107 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 PLA2G10O15496 165 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 SRIP30626 198 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 KIR2DS2P43631 304 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 VMA21Q3ZAQ7 101 aa5.4□□□□□ -1.55
SMG1-217ENST00000569764 BAHCC1Q9P281 2608 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 BORCS7-ASMTA0A0B4J1R7 106 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 IGHV1-18A0A0C4DH31 117 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 TCRBV4S1A1TA0A5B7 111 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 CLPSL1A2RUU4 121 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 IFITM5A6NNB3 132 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 PRYO14603 147 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 ELK1P19419 428 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HSPE1P61604 102 aaKnown RBP5.39□□□□□ -1.55
SMG1-217ENST00000569764 RHOGP84095 191 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 ATP5L2Q7Z4Y8 100 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 GGNQ86UU5 652 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 ANKRD29Q8N6D5 301 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 CLDND2Q8NHS1 167 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 GGTLC1Q9BX51 225 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 TMEM222Q9H0R3 208 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 Q9H8V8 135 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 USF3Q68DE3 2245 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 TMEM30CPA0ZSE6 113 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 H3BQ15 152 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 K7EMT4 169 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 MGST3O14880 152 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 NPFFO15130 113 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 EVI2AP22794 236 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 COX7A1P24310 79 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 SLC38A11Q08AI6 406 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 SFRP4Q6FHJ7 346 aaPredicted RBP5.39□□□□□ -1.55
SMG1-217ENST00000569764 CEACAM19Q7Z692 300 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 TMEM183AQ8IXX5 376 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 COL12A1Q99715 3063 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 SONP18583 2426 aaKnown RBP5.39□□□□□ -1.55
SMG1-217ENST00000569764 IGLV1-36A0A0B4J1U3 117 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 RBFOX3A6NFN3 312 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H2BKO60814 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 CA2P00918 260 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H2BJP06899 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 ATF1P18846 271 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H2BOP23527 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 BLVRBP30043 206 aaPredicted RBP5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H2BBP33778 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H2BDP58876 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H2BCP62807 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 CDK5R1Q15078 307 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST2H2BEQ16778 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.39□□□□□ -1.55
SMG1-217ENST00000569764 IBA57Q5T440 356 aaKnown RBP5.39□□□□□ -1.55
SMG1-217ENST00000569764 ZCCHC24Q8N2G6 241 aaKnown RBP5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H2BHQ93079 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 DERL3Q96Q80 235 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H2BNQ99877 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H2BMQ99879 126 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 AAMDCQ9H7C9 122 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 PLEKHF2Q9H8W4 249 aa5.39□□□□□ -1.55
SMG1-217ENST00000569764 TMEM212A6NML5 194 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 NCBP2LA6PVI3 153 aaKnown RBP5.38□□□□□ -1.55
SMG1-217ENST00000569764 IGHV4-39P01824 125 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 PTHLHP12272 177 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 CA6P23280 308 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 SRPXP78539 464 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 ZNF660Q6AZW8 331 aaPredicted RBP5.38□□□□□ -1.55
SMG1-217ENST00000569764 C5orf63A6NC05 138 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 ENDOGQ14249 297 aaKnown RBP5.38□□□□□ -1.55
SMG1-217ENST00000569764 ADIRFQ15847 76 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 CNIH2Q6PI25 160 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 PPP1R27Q86WC6 154 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 GPR84Q9NQS5 396 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 TRBV20-1A0A075B6N2 111 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 H7BYZ3 331 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 GEMIN2O14893 280 aaKnown RBP5.38□□□□□ -1.55
SMG1-217ENST00000569764 NDUFC2O95298 119 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 PSG2P11465 335 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 IGFBP3P17936 291 aaPredicted RBP5.38□□□□□ -1.55
SMG1-217ENST00000569764 B3GALT5-AS1P59052 145 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 TPPP2P59282 170 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 TDRG1Q3Y452 100 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 MIDNQ504T8 468 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 GLYATL3Q5SZD4 288 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 FBXW12Q6X9E4 464 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 ZNF429Q86V71 674 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 OR5AP2Q8NGF4 316 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 TMEM106AQ96A25 262 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 ZNF714Q96N38 554 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 CLEC7AQ9BXN2 247 aa5.38□□□□□ -1.55
SMG1-217ENST00000569764 MRPL27Q9P0M9 148 aaKnown RBP5.38□□□□□ -1.55
SMG1-217ENST00000569764 ETV2O00321 342 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms