RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 LOC102724200A0A096LPH7 203 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-211ENST00000568291 OR4C46A6NHA9 309 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 ZFP92A6NM28 416 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 FAM25EA8MYX2 175 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 DNASE2O00115 360 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-211ENST00000568291 SSSCA1O60232 199 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 GATA2P23769 480 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-211ENST00000568291 CRYBB3P26998 211 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 P2RY1P47900 373 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 ETFRF1Q6IPR1 90 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 TMEM182Q6ZP80 229 aaPredicted RBP7.03□□□□□ -1.28
SF3B3-211ENST00000568291 STXBP6Q8NFX7 210 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 OR1S2Q8NGQ3 325 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 IL17DQ8TAD2 202 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 METTL26Q96S19 204 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 C7orf50Q9BRJ6 194 aaKnown RBP7.03□□□□□ -1.28
SF3B3-211ENST00000568291 GGTLC1Q9BX51 225 aa7.03□□□□□ -1.28
SF3B3-211ENST00000568291 IGKV1OR2-108A0A075B7D4 117 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 IFNA21P01568 189 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 SLC25A6P12236 298 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 NKX2-1P43699 371 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-211ENST00000568291 PAX9P55771 341 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 DEFB131AP59861 70 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 YPEL3P61236 119 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-211ENST00000568291 ID3Q02535 119 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 IAH1Q2TAA2 248 aaPredicted RBP7.02□□□□□ -1.29
SF3B3-211ENST00000568291 OR8G2PQ6IF36 304 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 NOXA1Q86UR1 476 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 OR4D5Q8NGN0 318 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 MITD1Q8WV92 249 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 SLC35E1Q96K37 410 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 MAP6D1Q9H9H5 199 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 PSENENQ9NZ42 101 aa7.02□□□□□ -1.29
SF3B3-211ENST00000568291 FAM240BA0A1B0GVZ2 78 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 SMCO3A2RU48 225 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 KNCNA6PVL3 124 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 FAM90A26D6RGX4 464 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 PRSS46E5RG02 174 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 MED6O75586 246 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 TOMM40O96008 361 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 HNRNPCP07910 306 aaKnown RBP eCLIP7.01□□□□□ -1.29
SF3B3-211ENST00000568291 H2AFB2P0C5Z0 115 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 ZNF688P0C7X2 276 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 GPX4P36969 197 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-211ENST00000568291 DEFB1P60022 68 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 LYZP61626 148 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 RRAS2P62070 204 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-211ENST00000568291 RAB11AP62491 216 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 DEFB135Q30KP9 77 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 STPG3Q8N7X2 389 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 ZBTB8BQ8NAP8 495 aaPredicted RBP7.01□□□□□ -1.29
SF3B3-211ENST00000568291 OVOL2Q9BRP0 275 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 CCDC32Q9BV29 185 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 CACFD1Q9UGQ2 172 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 STRAPQ9Y3F4 350 aaKnown RBP7.01□□□□□ -1.29
SF3B3-211ENST00000568291 U3KQE9 123 aa7.01□□□□□ -1.29
SF3B3-211ENST00000568291 A0A1W2PS18 150 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 SCGB2A1O75556 95 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 MBPP02686 304 aaPredicted RBP7□□□□□ -1.29
SF3B3-211ENST00000568291 METTL15P1P0C7V9 234 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 PRB4P10163 310 aaPredicted RBP7□□□□□ -1.29
SF3B3-211ENST00000568291 PAFAH1B2P68402 229 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 EWSR1Q01844 656 aaKnown RBP eCLIP7□□□□□ -1.29
SF3B3-211ENST00000568291 ZNF846Q147U1 533 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 C16orf54Q6UWD8 224 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 ACOT7LQ6ZUV0 252 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 ZNF431Q8TF32 576 aaPredicted RBP7□□□□□ -1.29
SF3B3-211ENST00000568291 GLMPQ8WWB7 406 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 S100ZQ8WXG8 99 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 RNF125Q96EQ8 232 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 CIB3Q96Q77 187 aaPredicted RBP7□□□□□ -1.29
SF3B3-211ENST00000568291 PTTG2Q9NZH5 202 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 LSM5Q9Y4Y9 91 aaKnown RBP7□□□□□ -1.29
SF3B3-211ENST00000568291 HYDINQ4G0P3 5121 aa7□□□□□ -1.29
SF3B3-211ENST00000568291 PIGBOS1A0A0B4J2F0 54 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 C5orf51A6NDU8 294 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 PMS2P5A8MQ11 134 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 K7EQG2 157 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 BUB3O43684 328 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 UPK1BO75841 260 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 SIX6O95475 246 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 RPP30P78346 268 aaKnown RBP6.99□□□□□ -1.29
SF3B3-211ENST00000568291 AKR1C1Q04828 323 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 ARL16Q0P5N6 197 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 ASAH1Q13510 395 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 C12orf45Q8N5I9 185 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-211ENST00000568291 DCANP1Q8TF63 244 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 GRAMD2BQ96HH9 432 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 NARS2Q96I59 477 aaKnown RBP6.99□□□□□ -1.29
SF3B3-211ENST00000568291 DOK5Q9P104 306 aa6.99□□□□□ -1.29
SF3B3-211ENST00000568291 RCL1Q9Y2P8 373 aaKnown RBP6.99□□□□□ -1.29
SF3B3-211ENST00000568291 C7orf66A4D0T2 115 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 SNRPGP15A8MWD9 76 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 SPRY2O43597 315 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 ORM2P19652 201 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 BMI1P35226 326 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 EIF2B2P49770 351 aaKnown RBP6.98□□□□□ -1.29
SF3B3-211ENST00000568291 ATP5IP56385 69 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-211ENST00000568291 PSMG4Q5JS54 123 aa6.98□□□□□ -1.29
SF3B3-211ENST00000568291 MZT2BQ6NZ67 158 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms