RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 NEURL2Q9BR09 285 aa9.56□□□□□ -0.88
GINS3-209ENST00000567909 PBDC1Q9BVG4 233 aa9.56□□□□□ -0.88
GINS3-209ENST00000567909 COL7A1Q02388 2944 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 IGKV1OR2-108A0A075B7D4 117 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 FAM24AA6NFZ4 105 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 CST7O76096 145 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 HNRNPCP07910 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
GINS3-209ENST00000567909 H2BFSP57053 126 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 RPL11P62913 178 aaKnown RBP9.55□□□□□ -0.88
GINS3-209ENST00000567909 USF2Q15853 346 aaPredicted RBP9.55□□□□□ -0.88
GINS3-209ENST00000567909 TCF24Q7RTU0 167 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 THAP8Q8NA92 274 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 RNF125Q96EQ8 232 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 TRGV9Q99603 122 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 NMES1Q9C002 83 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 C11orf1Q9H5F2 150 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 TMEM231Q9H6L2 316 aa9.55□□□□□ -0.88
GINS3-209ENST00000567909 DNAH9Q9NYC9 4486 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 A0A1W2PS18 150 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 TSPAN4O14817 238 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 DFFBO76075 338 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 RLN2P04090 185 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 IGHV4-30-4P0DP06 118 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 CRYBB3P26998 211 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 TFPI2P48307 235 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 LYZP61626 148 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 DLK1P80370 383 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 CYCSP99999 105 aaKnown RBP9.54□□□□□ -0.88
GINS3-209ENST00000567909 ARL16Q0P5N6 197 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 Q6ZNX1 250 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 TMEM144Q7Z5S9 345 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 LILRB2Q8N423 598 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 GBGT1Q8N5D6 347 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 TMEM217Q8N7C4 229 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 SPAG8Q99932 426 aaPredicted RBP9.54□□□□□ -0.88
GINS3-209ENST00000567909 B9D2Q9BPU9 175 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 WFDC10AQ9H1F0 79 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 VSIRQ9H7M9 311 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 TUBA4BQ9H853 241 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 RABAC1Q9UI14 185 aa9.54□□□□□ -0.88
GINS3-209ENST00000567909 OR11H12B2RN74 326 aa9.53□□□□□ -0.88
GINS3-209ENST00000567909 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
GINS3-209ENST00000567909 GATA2P23769 480 aaPredicted RBP9.53□□□□□ -0.88
GINS3-209ENST00000567909 P2RY1P47900 373 aa9.53□□□□□ -0.88
GINS3-209ENST00000567909 SLC38A11Q08AI6 406 aa9.53□□□□□ -0.88
GINS3-209ENST00000567909 WFDC3Q8IUB2 231 aa9.53□□□□□ -0.88
GINS3-209ENST00000567909 DEFB125Q8N687 156 aa9.53□□□□□ -0.88
GINS3-209ENST00000567909 GRAMD2BQ96HH9 432 aa9.53□□□□□ -0.88
GINS3-209ENST00000567909 ASCL2Q99929 193 aa9.53□□□□□ -0.88
GINS3-209ENST00000567909 LYRM2Q9NU23 88 aaPredicted RBP9.53□□□□□ -0.88
GINS3-209ENST00000567909 OR5AC2Q9NZP5 309 aa9.53□□□□□ -0.88
GINS3-209ENST00000567909 IGSF23A1L1A6 192 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 OR4C46A6NHA9 309 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 DEDDO75618 318 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 FAM90A2PQ658T7 463 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 STX12Q86Y82 276 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 TMEM252Q8N6L7 170 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 BPIFCQ8NFQ6 507 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 PPP1R1CQ8WVI7 109 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 PPP1R14BQ96C90 147 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 MED28Q9H204 178 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 NPVFQ9HCQ7 196 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 UBQLN2Q9UHD9 624 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 U3KQE9 123 aa9.52□□□□□ -0.89
GINS3-209ENST00000567909 E5RGE8 158 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 FNDC10F2Z333 226 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 H0YIZ8 118 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 DNASE2O00115 360 aaPredicted RBP9.51□□□□□ -0.89
GINS3-209ENST00000567909 CD5P06127 495 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 EIF2B2P49770 351 aaKnown RBP9.51□□□□□ -0.89
GINS3-209ENST00000567909 SULT1A1P50225 295 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 PAFAH1B2P68402 229 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 TMEM182Q6ZP80 229 aaPredicted RBP9.51□□□□□ -0.89
GINS3-209ENST00000567909 CYP2G1PQ6ZSU1 146 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 STXBP6Q8NFX7 210 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 GGACTQ9BVM4 153 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 MS4A6AQ9H2W1 248 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 SRD5A3Q9H8P0 318 aa9.51□□□□□ -0.89
GINS3-209ENST00000567909 ORM2P19652 201 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 CXCL3P19876 107 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 HBG1P69891 147 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 HBG2P69892 147 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 FCN2Q15485 313 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 TEPPQ6URK8 271 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 C16orf54Q6UWD8 224 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 C19orf73Q9NVV2 129 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 DOK5Q9P104 306 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 PFDN2Q9UHV9 154 aa9.5□□□□□ -0.89
GINS3-209ENST00000567909 UBE2L5PA0A1B0GUS4 154 aa9.49□□□□□ -0.89
GINS3-209ENST00000567909 HELTA6NFD8 242 aa9.49□□□□□ -0.89
GINS3-209ENST00000567909 A8MZ25 164 aa9.49□□□□□ -0.89
GINS3-209ENST00000567909 BUB3O43684 328 aa9.49□□□□□ -0.89
GINS3-209ENST00000567909 MPC2O95563 127 aa9.49□□□□□ -0.89
GINS3-209ENST00000567909 CFDP00746 253 aaPredicted RBP9.49□□□□□ -0.89
GINS3-209ENST00000567909 PET100P0DJ07 73 aa9.49□□□□□ -0.89
GINS3-209ENST00000567909 S100A11P31949 105 aa9.49□□□□□ -0.89
GINS3-209ENST00000567909 NUP62P37198 522 aaPredicted RBP9.49□□□□□ -0.89
GINS3-209ENST00000567909 EWSR1Q01844 656 aaKnown RBP eCLIP9.49□□□□□ -0.89
GINS3-209ENST00000567909 ODF3L2Q3SX64 289 aa9.49□□□□□ -0.89
GINS3-209ENST00000567909 SBSPONQ8IVN8 264 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms