RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 Q6ZNX1 250 aa12.12□□□□□ -0.47
TSR3-202ENST00000566296 ZBTB8BQ8NAP8 495 aaPredicted RBP12.12□□□□□ -0.47
TSR3-202ENST00000566296 OR4D5Q8NGN0 318 aa12.12□□□□□ -0.47
TSR3-202ENST00000566296 ZNF414Q96IQ9 312 aa12.12□□□□□ -0.47
TSR3-202ENST00000566296 ENY2Q9NPA8 101 aa12.12□□□□□ -0.47
TSR3-202ENST00000566296 MGAT4CQ9UBM8 478 aa12.12□□□□□ -0.47
TSR3-202ENST00000566296 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
TSR3-202ENST00000566296 DFFBO76075 338 aa12.11□□□□□ -0.47
TSR3-202ENST00000566296 NKX2-1P43699 371 aaPredicted RBP12.11□□□□□ -0.47
TSR3-202ENST00000566296 HOXA1P49639 335 aaPredicted RBP12.11□□□□□ -0.47
TSR3-202ENST00000566296 RRAS2P62070 204 aaPredicted RBP12.11□□□□□ -0.47
TSR3-202ENST00000566296 CYCSP99999 105 aaKnown RBP12.11□□□□□ -0.47
TSR3-202ENST00000566296 ID3Q02535 119 aa12.11□□□□□ -0.47
TSR3-202ENST00000566296 TMEM231Q9H6L2 316 aa12.11□□□□□ -0.47
TSR3-202ENST00000566296 GSKIPQ9P0R6 139 aa12.11□□□□□ -0.47
TSR3-202ENST00000566296 NXPH3O95157 252 aa12.1□□□□□ -0.47
TSR3-202ENST00000566296 IGHV3-48P01763 117 aa12.1□□□□□ -0.47
TSR3-202ENST00000566296 NPBWR1P48145 328 aa12.1□□□□□ -0.47
TSR3-202ENST00000566296 TCTAP57738 103 aa12.1□□□□□ -0.47
TSR3-202ENST00000566296 DEFB131AP59861 70 aa12.1□□□□□ -0.47
TSR3-202ENST00000566296 C2CD4CQ8TF44 421 aa12.1□□□□□ -0.47
TSR3-202ENST00000566296 ST8SIA2Q92186 375 aa12.1□□□□□ -0.47
TSR3-202ENST00000566296 NMES1Q9C002 83 aa12.1□□□□□ -0.47
TSR3-202ENST00000566296 TRAV2A0A0B4J234 112 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 WRBO00258 174 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 SYNGR2O43760 224 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 SIX6O95475 246 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 RPL11P62913 178 aaKnown RBP12.09□□□□□ -0.47
TSR3-202ENST00000566296 FCN2Q15485 313 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 SPINK9Q5DT21 86 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 TOMM20LQ6UXN7 152 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 ZNF600Q6ZNG1 722 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 DTD1Q8TEA8 209 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 RBKSQ9H477 322 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 VSIRQ9H7M9 311 aa12.09□□□□□ -0.47
TSR3-202ENST00000566296 HEYLQ9NQ87 328 aaPredicted RBP12.09□□□□□ -0.47
TSR3-202ENST00000566296 SCGB1D2O95969 90 aa12.08□□□□□ -0.48
TSR3-202ENST00000566296 SNCAP37840 140 aa12.08□□□□□ -0.48
TSR3-202ENST00000566296 H2BFSP57053 126 aa12.08□□□□□ -0.48
TSR3-202ENST00000566296 IL15RAQ13261 267 aa12.08□□□□□ -0.48
TSR3-202ENST00000566296 LEMD1Q68G75 181 aa12.08□□□□□ -0.48
TSR3-202ENST00000566296 STHQ8IWL8 128 aa12.08□□□□□ -0.48
TSR3-202ENST00000566296 OR11H7Q8NGC8 314 aa12.08□□□□□ -0.48
TSR3-202ENST00000566296 ASB13Q8WXK3 278 aa12.08□□□□□ -0.48
TSR3-202ENST00000566296 CIB3Q96Q77 187 aaPredicted RBP12.08□□□□□ -0.48
TSR3-202ENST00000566296 MS4A6AQ9H2W1 248 aa12.08□□□□□ -0.48
TSR3-202ENST00000566296 PUS1Q9Y606 427 aaKnown RBP eCLIP12.08□□□□□ -0.48
TSR3-202ENST00000566296 IGHV3-66A0A0C4DH42 116 aa12.07□□□□□ -0.48
TSR3-202ENST00000566296 CORTO00230 105 aa12.07□□□□□ -0.48
TSR3-202ENST00000566296 DEFB4AO15263 64 aa12.07□□□□□ -0.48
TSR3-202ENST00000566296 SCGB2A1O75556 95 aa12.07□□□□□ -0.48
TSR3-202ENST00000566296 MBPP02686 304 aaPredicted RBP12.07□□□□□ -0.48
TSR3-202ENST00000566296 CXCL3P19876 107 aa12.07□□□□□ -0.48
TSR3-202ENST00000566296 SUB1P53999 127 aaKnown RBP eCLIP12.07□□□□□ -0.48
TSR3-202ENST00000566296 MAGT1Q9H0U3 335 aa12.07□□□□□ -0.48
TSR3-202ENST00000566296 RABAC1Q9UI14 185 aa12.07□□□□□ -0.48
TSR3-202ENST00000566296 A0A1W2PS18 150 aa12.06□□□□□ -0.48
TSR3-202ENST00000566296 C11orf94C9JXX5 98 aa12.06□□□□□ -0.48
TSR3-202ENST00000566296 APOHP02749 345 aaPredicted RBP12.06□□□□□ -0.48
TSR3-202ENST00000566296 HTR2BP41595 481 aa12.06□□□□□ -0.48
TSR3-202ENST00000566296 ATP5IP56385 69 aaPredicted RBP12.06□□□□□ -0.48
TSR3-202ENST00000566296 POLR2GP62487 172 aaKnown RBP eCLIP12.06□□□□□ -0.48
TSR3-202ENST00000566296 TMEM41BQ5BJD5 291 aa12.06□□□□□ -0.48
TSR3-202ENST00000566296 NOXA1Q86UR1 476 aa12.06□□□□□ -0.48
TSR3-202ENST00000566296 RAB40CQ96S21 281 aa12.06□□□□□ -0.48
TSR3-202ENST00000566296 KRTAP17-1Q9BYP8 105 aa12.06□□□□□ -0.48
TSR3-202ENST00000566296 ZFAND3Q9H8U3 227 aa12.06□□□□□ -0.48
TSR3-202ENST00000566296 U3KQ87 197 aa12.06□□□□□ -0.48
TSR3-202ENST00000566296 HECTD4Q9Y4D8 3996 aa12.05□□□□□ -0.48
TSR3-202ENST00000566296 K7EPK0 472 aa12.05□□□□□ -0.48
TSR3-202ENST00000566296 SSSCA1O60232 199 aa12.05□□□□□ -0.48
TSR3-202ENST00000566296 PVALBP20472 110 aaPredicted RBP12.05□□□□□ -0.48
TSR3-202ENST00000566296 RPP30P78346 268 aaKnown RBP12.05□□□□□ -0.48
TSR3-202ENST00000566296 BSXQ3C1V8 233 aa12.05□□□□□ -0.48
TSR3-202ENST00000566296 SLC24A4Q8NFF2 622 aa12.05□□□□□ -0.48
TSR3-202ENST00000566296 STXBP6Q8NFX7 210 aa12.05□□□□□ -0.48
TSR3-202ENST00000566296 NARS2Q96I59 477 aaKnown RBP12.05□□□□□ -0.48
TSR3-202ENST00000566296 METTL26Q96S19 204 aa12.05□□□□□ -0.48
TSR3-202ENST00000566296 RCL1Q9Y2P8 373 aaKnown RBP12.05□□□□□ -0.48
TSR3-202ENST00000566296 LSM5Q9Y4Y9 91 aaKnown RBP12.05□□□□□ -0.48
TSR3-202ENST00000566296 AGRNO00468 2067 aa12.05□□□□□ -0.48
TSR3-202ENST00000566296 IGLL5B9A064 214 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 GIPP09681 153 aaPredicted RBP12.04□□□□□ -0.48
TSR3-202ENST00000566296 RNASE2P10153 161 aaKnown RBP12.04□□□□□ -0.48
TSR3-202ENST00000566296 SPP1P10451 314 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 IAPPP10997 89 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 NPPCP23582 126 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 TAS2R30P59541 319 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 S100A10P60903 97 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 RAB32Q13637 225 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 C2orf83Q53S99 150 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 MORN3Q6PF18 240 aaPredicted RBP12.04□□□□□ -0.48
TSR3-202ENST00000566296 LILRB2Q8N423 598 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 FAM24BQ8N5W8 94 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 Q8NAQ8 132 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 SMIM8Q96KF7 97 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 HRH4Q9H3N8 390 aa12.04□□□□□ -0.48
TSR3-202ENST00000566296 L7N2F9 121 aa12.03□□□□□ -0.48
TSR3-202ENST00000566296 TMEM50AO95807 157 aa12.03□□□□□ -0.48
TSR3-202ENST00000566296 IFNA10P01566 189 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms