RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 WNT10AQ9GZT5 417 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 TMPRSS5Q9H3S3 457 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 SDF2L1Q9HCN8 221 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 TNFRSF19Q9NS68 423 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 DOK5Q9P104 306 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 NAT8Q9UHE5 227 aa13.23□□□□□ -0.29
RAB40C-210ENST00000566290 TRAV30A0A087WSZ9 112 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 IGHV7-81A0A0B4J1V7 117 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 C11orf94C9JXX5 98 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 K7EIM0 57 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 IGLC1P0CG04 106 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 ASPHD1Q5U4P2 390 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 C12orf54Q6X4T0 127 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 TMEM37Q8WXS4 190 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 SSX3Q99909 188 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 THYN1Q9P016 225 aa13.22□□□□□ -0.29
RAB40C-210ENST00000566290 MRPL36Q9P0J6 103 aaKnown RBP13.22□□□□□ -0.29
RAB40C-210ENST00000566290 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 M0R036 132 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 COX7A2P2O60397 106 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 BRI3O95415 125 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 DEFA4P12838 97 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 NDPQ00604 133 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 FBLN7Q53RD9 439 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 C16orf82Q7Z2V1 217 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 SGMS2Q8NHU3 365 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 FAM110DQ8TAY7 271 aaPredicted RBP13.21□□□□□ -0.29
RAB40C-210ENST00000566290 TXN2Q99757 166 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 ZNF580Q9UK33 172 aa13.21□□□□□ -0.29
RAB40C-210ENST00000566290 PUS1Q9Y606 427 aaKnown RBP eCLIP13.21□□□□□ -0.29
RAB40C-210ENST00000566290 ZNF727A8MUV8 499 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 HMGB3O15347 200 aaKnown RBP13.2□□□□□ -0.3
RAB40C-210ENST00000566290 C10orf113Q5VZT2 155 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 MIR17HGQ75NE6 70 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 OR4F5Q8NH21 305 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 FAM167A-AS1Q96KT0 104 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 RBM14Q96PK6 669 aaKnown RBP13.2□□□□□ -0.3
RAB40C-210ENST00000566290 FANCD2OSQ96PS1 177 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 OR4F4Q96R69 305 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 RASL11BQ9BPW5 248 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 SMIM7Q9BQ49 75 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 CTDSP1Q9GZU7 261 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 RPS10P5Q9NQ39 176 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 MOB4Q9Y3A3 225 aa13.2□□□□□ -0.3
RAB40C-210ENST00000566290 TRAV40A0A0B4J280 105 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 NCBP2LA6PVI3 153 aaKnown RBP13.19□□□□□ -0.3
RAB40C-210ENST00000566290 M0QZK8 103 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 TSPAN4O14817 238 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 SCGB2A1O75556 95 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 EGR2P11161 476 aaPredicted RBP13.19□□□□□ -0.3
RAB40C-210ENST00000566290 FOLR2P14207 255 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 YPEL3P61236 119 aaPredicted RBP13.19□□□□□ -0.3
RAB40C-210ENST00000566290 SPATA31B1PQ5VZV4 182 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 PATE2Q6UY27 113 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 S100A7AQ86SG5 101 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 C5orf56Q8N8D9 126 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 VN1R17PQ8TDU5 208 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 ZNF503Q96F45 646 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 PARLQ9H300 379 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 LY96Q9Y6Y9 160 aa13.19□□□□□ -0.3
RAB40C-210ENST00000566290 HNF1AP20823 631 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 CD24P25063 80 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 ZNF90Q03938 601 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 TMEM241Q24JQ0 296 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 RNF212Q495C1 297 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 AKIRIN2Q53H80 203 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 IQCF2Q8IXL9 164 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.18□□□□□ -0.3
RAB40C-210ENST00000566290 PIFOQ8TCI5 191 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 RPUSD4Q96CM3 377 aaKnown RBP13.18□□□□□ -0.3
RAB40C-210ENST00000566290 YPEL4Q96NS1 127 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 UHRF2Q96PU4 802 aa13.18□□□□□ -0.3
RAB40C-210ENST00000566290 COLCA2A8K830 154 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 C9JCJ5 164 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 HYPMO75409 117 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 TOMM40O96008 361 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 MT-ND4LP03901 98 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 SRP14P37108 136 aaKnown RBP13.17□□□□□ -0.3
RAB40C-210ENST00000566290 TMEM88Q6PEY1 159 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 SLC25A2Q9BXI2 301 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 RNF24Q9Y225 148 aa13.17□□□□□ -0.3
RAB40C-210ENST00000566290 WNK2Q9Y3S1 2297 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 OR2C1O95371 312 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 FSHBP01225 129 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 GATA2P23769 480 aaPredicted RBP13.16□□□□□ -0.3
RAB40C-210ENST00000566290 MFAP4P55083 255 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 C19orf54Q5BKX5 351 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 C9orf139Q6ZV77 190 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 OR51G1Q8NGK1 321 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 ZNF355PQ9NSJ1 428 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 GAR1Q9NY12 217 aaKnown RBP13.16□□□□□ -0.3
RAB40C-210ENST00000566290 TMEM14CQ9P0S9 112 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 PITPNC1Q9UKF7 332 aa13.16□□□□□ -0.3
RAB40C-210ENST00000566290 YTHDF2Q9Y5A9 579 aaKnown RBP13.16□□□□□ -0.3
RAB40C-210ENST00000566290 TRBV9A0A0B4J1U6 114 aa13.15□□□□□ -0.3
RAB40C-210ENST00000566290 A6NDX4 124 aa13.15□□□□□ -0.3
RAB40C-210ENST00000566290 EIF3GO75821 320 aaKnown RBP eCLIP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms