RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 MORN3Q6PF18 240 aaPredicted RBP11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 GTF3AQ92664 365 aaKnown RBP11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 VSIRQ9H7M9 311 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 IGKV1D-8A0A087WSZ0 117 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 LILRA1O75019 489 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 IGHV1-8P0DP01 117 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 ATP5L2Q7Z4Y8 100 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 RPUSD1Q9UJJ7 312 aaKnown RBP11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 TIMP3P35625 211 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 SRSF3P84103 164 aaKnown RBP11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 NDPQ00604 133 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 ACTL10Q5JWF8 245 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 GATD1Q8NB37 220 aa11.22□□□□□ -0.61
CX3CL1-204ENST00000565912 A0A0A6YYD4 124 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 A8MXK9 166 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 CDK2AP2O75956 126 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 ATRAIDQ6UW56 229 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 EXOC3-AS1Q8N2X6 119 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 TSKUQ8WUA8 353 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 IGHV1-3A0A0C4DH29 117 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 M0R2P5 195 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 PRR31Q5SQ13 230 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 TPTE2P1Q5T6R2 138 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 IFI27L1Q96BM0 104 aa11.21□□□□□ -0.61
CX3CL1-204ENST00000565912 FAM90A9PA6NNJ1 464 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 B4DSR2 109 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 PAX4O43316 350 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 NCR2O95944 276 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 PSG1P11464 419 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 ID3Q02535 119 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 NR2C2APQ86WQ0 139 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 SCRT1Q9BWW7 348 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 WDR83OSQ9Y284 106 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 ZNF236Q9UL36 1845 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 GSN-AS1Q9NRJ2 163 aa11.21□□□□□ -0.62
CX3CL1-204ENST00000565912 TRAV9-2A0A087WT02 112 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 TRAV8-4A0A0B4J246 113 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 WFDC1Q9HC57 220 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 LAGE3Q14657 143 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 PLSCR4Q9NRQ2 329 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 RPL36AP83881 106 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 CFHR1Q03591 330 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 TREML4Q6UXN2 200 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 FLVCR1-AS1Q8TAF5 88 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 RPL36ALQ969Q0 106 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 SRRM4A7MD48 611 aaKnown RBP11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 NTN3O00634 580 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 KLF17Q5JT82 389 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 PAQR4Q8N4S7 273 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 FBLN5Q9UBX5 448 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 IGKV1-12A0A0C4DH73 117 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 SRRM5B3KS81 715 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 IGKV1D-12P01611 117 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 ZNF474Q6S9Z5 364 aaPredicted RBP11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 UBE2E2Q96LR5 201 aa11.2□□□□□ -0.62
CX3CL1-204ENST00000565912 H0YIZ8 118 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 TMEM178BH3BS89 294 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 TEX38Q6PEX7 206 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 AKAP6Q13023 2319 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 FCN3O75636 299 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 GNB1LQ9BYB4 327 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 SLC25A39Q9BZJ4 359 aaPredicted RBP11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 CRYGSP22914 178 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 HEPN1Q6WQI6 88 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 SCN5AQ14524 2016 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 ATXN8Q156A1 80 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 C20orf204Q6ZNR8 217 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 LCNL1Q6ZST4 164 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 ZNF329Q86UD4 541 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 ERG28Q9UKR5 140 aa11.19□□□□□ -0.62
CX3CL1-204ENST00000565912 TOMM40O96008 361 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 ORAOV1Q8WV07 137 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 SCN8AQ9UQD0 1980 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 IL18BPO95998 194 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 LY6G6FQ5SQ64 297 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 KLHL30-AS1Q8NEE0 82 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 CHCHD1Q96BP2 118 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 EP300Q09472 2414 aaPredicted RBP11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 ZDBF2Q9HCK1 2354 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 LYPD3O95274 346 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 TMEM249Q2WGJ8 235 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 GGNQ86UU5 652 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 A0A1B0GWJ7 208 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 CACNA1GO43497 2377 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 INTS1Q8N201 2190 aaKnown RBP11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 BTCP35070 178 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 MINOS1Q5TGZ0 78 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 MINOS1-NBL1R4GNA1 71 aa11.18□□□□□ -0.62
CX3CL1-204ENST00000565912 DICER1Q9UPY3 1922 aaKnown RBP11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 TCRAP04437 139 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 CD177Q8N6Q3 437 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 LAMTOR3Q9UHA4 124 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 D6R8Y8 96 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 GGTLC1Q9BX51 225 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 PDCD11Q14690 1871 aaKnown RBP11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 A8MWV9 139 aa11.17□□□□□ -0.62
CX3CL1-204ENST00000565912 EFNA2O43921 213 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms