RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 RND2P52198 227 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 PAX9P55771 341 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 IL15RAQ13261 267 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 SPANXN5Q5MJ07 72 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 GSG1LQ6UXU4 331 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 LILRB2Q8N423 598 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 SMIM8Q96KF7 97 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 RAB40CQ96S21 281 aa10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 RCL1Q9Y2P8 373 aaKnown RBP10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 STRAPQ9Y3F4 350 aaKnown RBP10.12□□□□□ -0.79
VPS9D1-204ENST00000565023 PRSS46E5RG02 174 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 H3BP45 60 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 DNASE2O00115 360 aaPredicted RBP10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 SCGB2A1O75556 95 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 DFFBO76075 338 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 BMI1P35226 326 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 TAS2R30P59541 319 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 DEFB135Q30KP9 77 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 OR1S2Q8NGQ3 325 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 NPIPB3Q92617 1050 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 ACY3Q96HD9 319 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 PSENENQ9NZ42 101 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 RABAC1Q9UI14 185 aa10.11□□□□□ -0.79
VPS9D1-204ENST00000565023 C7orf66A4D0T2 115 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 NPPCP23582 126 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 OR10J1P30954 320 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 APOC4P55056 127 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 YPEL3P61236 119 aaPredicted RBP10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 PAFAH1B2P68402 229 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 GAMTQ14353 236 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 METTL26Q96S19 204 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 OVOL2Q9BRP0 275 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 MAP6D1Q9H9H5 199 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 PAIP2BQ9ULR5 123 aaKnown RBP10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 LYSTQ99698 3801 aa10.1□□□□□ -0.79
VPS9D1-204ENST00000565023 PMS2P5A8MQ11 134 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 K7EPK0 472 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 TSC22D2O75157 780 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 FAM90A2PQ658T7 463 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 TMEM14EPQ6UXP3 125 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 STPG3Q8N7X2 389 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 STXBP6Q8NFX7 210 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 SLC35E1Q96K37 410 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 MS4A6AQ9H2W1 248 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 C11orf1Q9H5F2 150 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 TMEM231Q9H6L2 316 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 VSIRQ9H7M9 311 aa10.09□□□□□ -0.79
VPS9D1-204ENST00000565023 GOSR2O14653 212 aa10.08□□□□□ -0.8
VPS9D1-204ENST00000565023 DEFB131AP59861 70 aa10.08□□□□□ -0.8
VPS9D1-204ENST00000565023 LEMD1Q68G75 181 aa10.08□□□□□ -0.8
VPS9D1-204ENST00000565023 FAM24BQ8N5W8 94 aa10.08□□□□□ -0.8
VPS9D1-204ENST00000565023 Q8WTZ3 238 aa10.08□□□□□ -0.8
VPS9D1-204ENST00000565023 NARS2Q96I59 477 aaKnown RBP10.08□□□□□ -0.8
VPS9D1-204ENST00000565023 LSM5Q9Y4Y9 91 aaKnown RBP10.08□□□□□ -0.8
VPS9D1-204ENST00000565023 HYDINQ4G0P3 5121 aa10.08□□□□□ -0.8
VPS9D1-204ENST00000565023 IGKV1D-37A0A075B6S9 117 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 A0A1W2PS18 150 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 SPRY2O43597 315 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 SSNA1O43805 119 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 SIX6O95475 246 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 TOMM40O96008 361 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 P2RY1P47900 373 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 RAB32Q13637 225 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 THAP8Q8NA92 274 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 NMES1Q9C002 83 aa10.07□□□□□ -0.8
VPS9D1-204ENST00000565023 AGRNO00468 2067 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 IGKV1OR2-108A0A075B7D4 117 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 A0A0J9YWU9 116 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 ZFP92A6NM28 416 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 L7N2F9 121 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 CCNKO75909 580 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 IL4P05112 153 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 HNRNPCP07910 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 METTL15P1P0C7V9 234 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 RD3LP0DJH9 198 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 CRYBB3P26998 211 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 H2BFSP57053 126 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 VAMP2P63027 116 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 PMS2P11Q13670 270 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 RGS21Q2M5E4 152 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 OR8G2PQ6IF36 304 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 ACOT7LQ6ZUV0 252 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 TRGV9Q99603 122 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 ALG5Q9Y673 324 aa10.06□□□□□ -0.8
VPS9D1-204ENST00000565023 FNDC10F2Z333 226 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 UBE2CO00762 179 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 CD5P06127 495 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 ZNF688P0C7X2 276 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 PSG1P11464 419 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 PVALBP20472 110 aaPredicted RBP10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 S100A10P60903 97 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 DLK1P80370 383 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 CYCSP99999 105 aaKnown RBP10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 ZNF90Q03938 601 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 USF2Q15853 346 aaPredicted RBP10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 OR10P1Q8NGE3 313 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 IL17DQ8TAD2 202 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 GRAMD2BQ96HH9 432 aa10.05□□□□□ -0.8
VPS9D1-204ENST00000565023 PBDC1Q9BVG4 233 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms