RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 CCNKO75909 580 aa12.91□□□□□ -0.34
USB1-209ENST00000564387 IL4P05112 153 aa12.91□□□□□ -0.34
USB1-209ENST00000564387 FABP1P07148 127 aa12.91□□□□□ -0.34
USB1-209ENST00000564387 DLK1P80370 383 aa12.91□□□□□ -0.34
USB1-209ENST00000564387 TMEM231Q9H6L2 316 aa12.91□□□□□ -0.34
USB1-209ENST00000564387 TRAV2A0A0B4J234 112 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 OR4C46A6NHA9 309 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 DFFBO76075 338 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 HNRNPCP07910 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
USB1-209ENST00000564387 METTL15P1P0C7V9 234 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 ARL16Q0P5N6 197 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 RAB32Q13637 225 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 OR8G2PQ6IF36 304 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 TCF24Q7RTU0 167 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 OR10P1Q8NGE3 313 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 RNF125Q96EQ8 232 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 GGACTQ9BVM4 153 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 NMES1Q9C002 83 aa12.9□□□□□ -0.34
USB1-209ENST00000564387 BUB3O43684 328 aa12.89□□□□□ -0.35
USB1-209ENST00000564387 DEDDO75618 318 aa12.89□□□□□ -0.35
USB1-209ENST00000564387 CFDP00746 253 aaPredicted RBP12.89□□□□□ -0.35
USB1-209ENST00000564387 P2RY1P47900 373 aa12.89□□□□□ -0.35
USB1-209ENST00000564387 H2BFSP57053 126 aa12.89□□□□□ -0.35
USB1-209ENST00000564387 ODF3L2Q3SX64 289 aa12.89□□□□□ -0.35
USB1-209ENST00000564387 C16orf54Q6UWD8 224 aa12.89□□□□□ -0.35
USB1-209ENST00000564387 DEFB125Q8N687 156 aa12.89□□□□□ -0.35
USB1-209ENST00000564387 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
USB1-209ENST00000564387 WFDC10AQ9H1F0 79 aa12.89□□□□□ -0.35
USB1-209ENST00000564387 LSM5Q9Y4Y9 91 aaKnown RBP12.89□□□□□ -0.35
USB1-209ENST00000564387 IGHV3-66A0A0C4DH42 116 aa12.88□□□□□ -0.35
USB1-209ENST00000564387 RBMY1BA6NDE4 496 aaKnown RBP12.88□□□□□ -0.35
USB1-209ENST00000564387 RBMY1EA6NEQ0 496 aaKnown RBP12.88□□□□□ -0.35
USB1-209ENST00000564387 L7N2F9 121 aa12.88□□□□□ -0.35
USB1-209ENST00000564387 GOSR2O14653 212 aa12.88□□□□□ -0.35
USB1-209ENST00000564387 RBMY1DP0C7P1 496 aaKnown RBP12.88□□□□□ -0.35
USB1-209ENST00000564387 VAMP2P63027 116 aa12.88□□□□□ -0.35
USB1-209ENST00000564387 CYCSP99999 105 aaKnown RBP12.88□□□□□ -0.35
USB1-209ENST00000564387 NARS2Q96I59 477 aaKnown RBP12.88□□□□□ -0.35
USB1-209ENST00000564387 ASCL2Q99929 193 aa12.88□□□□□ -0.35
USB1-209ENST00000564387 TM2D3Q9BRN9 247 aa12.88□□□□□ -0.35
USB1-209ENST00000564387 TUBA4BQ9H853 241 aa12.88□□□□□ -0.35
USB1-209ENST00000564387 NPVFQ9HCQ7 196 aa12.88□□□□□ -0.35
USB1-209ENST00000564387 LYRM2Q9NU23 88 aaPredicted RBP12.88□□□□□ -0.35
USB1-209ENST00000564387 RABAC1Q9UI14 185 aa12.88□□□□□ -0.35
USB1-209ENST00000564387 SIX6O95475 246 aa12.87□□□□□ -0.35
USB1-209ENST00000564387 PVALBP20472 110 aaPredicted RBP12.87□□□□□ -0.35
USB1-209ENST00000564387 EIF2B2P49770 351 aaKnown RBP12.87□□□□□ -0.35
USB1-209ENST00000564387 TMEM182Q6ZP80 229 aaPredicted RBP12.87□□□□□ -0.35
USB1-209ENST00000564387 STPG3Q8N7X2 389 aa12.87□□□□□ -0.35
USB1-209ENST00000564387 GRAMD2BQ96HH9 432 aa12.87□□□□□ -0.35
USB1-209ENST00000564387 CITED4Q96RK1 184 aa12.87□□□□□ -0.35
USB1-209ENST00000564387 MS4A6AQ9H2W1 248 aa12.87□□□□□ -0.35
USB1-209ENST00000564387 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
USB1-209ENST00000564387 CMC4P56277 68 aaPredicted RBP12.86□□□□□ -0.35
USB1-209ENST00000564387 PAFAH1B2P68402 229 aa12.86□□□□□ -0.35
USB1-209ENST00000564387 AKR1C1Q04828 323 aa12.86□□□□□ -0.35
USB1-209ENST00000564387 HAGHQ16775 308 aa12.86□□□□□ -0.35
USB1-209ENST00000564387 SRD5A3Q9H8P0 318 aa12.86□□□□□ -0.35
USB1-209ENST00000564387 SLC45A2Q9UMX9 530 aa12.86□□□□□ -0.35
USB1-209ENST00000564387 FAM24AA6NFZ4 105 aa12.85□□□□□ -0.35
USB1-209ENST00000564387 AP2S1P53680 142 aaPredicted RBP12.85□□□□□ -0.35
USB1-209ENST00000564387 PLP1P60201 277 aa12.85□□□□□ -0.35
USB1-209ENST00000564387 S100A10P60903 97 aa12.85□□□□□ -0.35
USB1-209ENST00000564387 OR2F1Q13607 317 aa12.85□□□□□ -0.35
USB1-209ENST00000564387 VWC2Q2TAL6 325 aa12.85□□□□□ -0.35
USB1-209ENST00000564387 C1orf194Q5T5A4 169 aa12.85□□□□□ -0.35
USB1-209ENST00000564387 TMEM252Q8N6L7 170 aa12.85□□□□□ -0.35
USB1-209ENST00000564387 DCANP1Q8TF63 244 aa12.85□□□□□ -0.35
USB1-209ENST00000564387 HUWE1Q7Z6Z7 4374 aaKnown RBP12.85□□□□□ -0.35
USB1-209ENST00000564387 IGSF23A1L1A6 192 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 HELTA6NFD8 242 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 H0YIZ8 118 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 K7EQG2 157 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 SSNA1O43805 119 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 SULT1A1P50225 295 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 CAV2P51636 162 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 RRAS2P62070 204 aaPredicted RBP12.84□□□□□ -0.35
USB1-209ENST00000564387 SELENOTP62341 195 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 TEPPQ6URK8 271 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 CYP2G1PQ6ZSU1 146 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 BPIFCQ8NFQ6 507 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 MGAT4CQ9UBM8 478 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 PFDN2Q9UHV9 154 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 ALG5Q9Y673 324 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 U3KQK5 164 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 TENM3Q9P273 2699 aa12.84□□□□□ -0.35
USB1-209ENST00000564387 STAB2Q8WWQ8 2551 aa12.83□□□□□ -0.35
USB1-209ENST00000564387 CST7O76096 145 aa12.83□□□□□ -0.36
USB1-209ENST00000564387 GATA2P23769 480 aaPredicted RBP12.83□□□□□ -0.36
USB1-209ENST00000564387 BCAP31P51572 246 aa12.83□□□□□ -0.36
USB1-209ENST00000564387 LYZP61626 148 aa12.83□□□□□ -0.36
USB1-209ENST00000564387 SLC38A11Q08AI6 406 aa12.83□□□□□ -0.36
USB1-209ENST00000564387 PBDC1Q9BVG4 233 aa12.83□□□□□ -0.36
USB1-209ENST00000564387 MAP6D1Q9H9H5 199 aa12.83□□□□□ -0.36
USB1-209ENST00000564387 UBQLN2Q9UHD9 624 aa12.83□□□□□ -0.36
USB1-209ENST00000564387 NBEAL2Q6ZNJ1 2754 aa12.83□□□□□ -0.36
USB1-209ENST00000564387 IGKV3-7A0A075B6H7 116 aa12.82□□□□□ -0.36
USB1-209ENST00000564387 SMCO3A2RU48 225 aa12.82□□□□□ -0.36
USB1-209ENST00000564387 E5RGE8 158 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms