RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 TCTEX1D4Q5JR98 221 aa14.24□□□□□ -0.13
GDE1-203ENST00000564172 VMO1Q7Z5L0 202 aa14.24□□□□□ -0.13
GDE1-203ENST00000564172 SAMD10Q9BYL1 202 aa14.24□□□□□ -0.13
GDE1-203ENST00000564172 SIRPDQ9H106 197 aa14.24□□□□□ -0.13
GDE1-203ENST00000564172 VPS13CQ709C8 3753 aa14.24□□□□□ -0.13
GDE1-203ENST00000564172 POLQO75417 2590 aa14.24□□□□□ -0.13
GDE1-203ENST00000564172 TRAV34A0A0B4J273 112 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 FAM90A26D6RGX4 464 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 SERF1AO75920 110 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 KLRD1Q13241 179 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 FFAR4Q5NUL3 377 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 NEGR1Q7Z3B1 354 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 C5orf17Q8NAS9 161 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 TMEM140Q9NV12 185 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 AMMECR1Q9Y4X0 333 aaPredicted RBP14.23□□□□□ -0.13
GDE1-203ENST00000564172 ZFP92A6NM28 416 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 FAM90A9PA6NNJ1 464 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 LY6LH3BQJ8 138 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 SYNGR2O43760 224 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 PAX9P55771 341 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 CKS1BP61024 79 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 POU2AF1Q16633 256 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 CLEC12BQ2HXU8 276 aa14.23□□□□□ -0.13
GDE1-203ENST00000564172 EAF1Q96JC9 268 aaPredicted RBP14.23□□□□□ -0.13
GDE1-203ENST00000564172 PEF1Q9UBV8 284 aaKnown RBP14.23□□□□□ -0.13
GDE1-203ENST00000564172 A0A0U1RQK1 487 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 SRRM4A7MD48 611 aaKnown RBP14.22□□□□□ -0.13
GDE1-203ENST00000564172 RBMXL2O75526 392 aaKnown RBP14.22□□□□□ -0.13
GDE1-203ENST00000564172 AZU1P20160 251 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 ADMP35318 185 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 LHX4Q969G2 390 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 TRAV3A0A0B4J244 114 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 OR2T8A6NH00 312 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 CD5LO43866 347 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 CRISP2P16562 243 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 KRTDAPP60985 99 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 HIST2H2BCQ6DN03 193 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 PDPNQ86YL7 162 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 OR1B1Q8NGR6 318 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 OSR1Q8TAX0 266 aaPredicted RBP14.22□□□□□ -0.13
GDE1-203ENST00000564172 FLYWCH2Q96CP2 140 aaKnown RBP14.22□□□□□ -0.13
GDE1-203ENST00000564172 RAB40CQ96S21 281 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 INSIG2Q9Y5U4 225 aa14.22□□□□□ -0.13
GDE1-203ENST00000564172 ABCA12Q86UK0 2595 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 FAM24AA6NFZ4 105 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 ODF3BA8MYP8 253 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 HTR1DP28221 377 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 PSG9Q00887 426 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 RELBQ01201 579 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 TMEM177Q53S58 311 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 RPEQ96AT9 228 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 DPM3Q9P2X0 92 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 WASHC3Q9Y3C0 194 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 RFNGQ9Y644 331 aa14.21□□□□□ -0.13
GDE1-203ENST00000564172 IGHV1-3A0A0C4DH29 117 aa14.21□□□□□ -0.14
GDE1-203ENST00000564172 CD1BP29016 333 aa14.21□□□□□ -0.14
GDE1-203ENST00000564172 OR4C13Q8NGP0 309 aa14.21□□□□□ -0.14
GDE1-203ENST00000564172 OR4A16Q8NH70 328 aa14.21□□□□□ -0.14
GDE1-203ENST00000564172 H0Y8G0 127 aa14.2□□□□□ -0.14
GDE1-203ENST00000564172 SLC25A16P16260 332 aa14.2□□□□□ -0.14
GDE1-203ENST00000564172 HOXB4P17483 251 aaPredicted RBP14.2□□□□□ -0.14
GDE1-203ENST00000564172 DEFB113Q30KQ7 82 aa14.2□□□□□ -0.14
GDE1-203ENST00000564172 UFSP1Q6NVU6 142 aa14.2□□□□□ -0.14
GDE1-203ENST00000564172 GTF2H5Q6ZYL4 71 aa14.2□□□□□ -0.14
GDE1-203ENST00000564172 HARBI1Q96MB7 349 aa14.2□□□□□ -0.14
GDE1-203ENST00000564172 QTRT1Q9BXR0 403 aaKnown RBP14.2□□□□□ -0.14
GDE1-203ENST00000564172 BEX4Q9NWD9 120 aaPredicted RBP14.2□□□□□ -0.14
GDE1-203ENST00000564172 ANKRD17O75179 2603 aaKnown RBP14.19□□□□□ -0.14
GDE1-203ENST00000564172 TRAV9-1A0A075B6T8 112 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 IGHV3-72A0A0B4J1Y9 119 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 CEBPZOSA8MTT3 80 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 IAPPP10997 89 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 C19orf35Q6ZS72 473 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 TMEM252Q8N6L7 170 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 A0A1W2PRD5 423 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 A0A1W2PRF3 423 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 A0A1W2PRM7 423 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 IGSF23A1L1A6 192 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 C17orf112F2Z3M2 114 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 USF1P22415 310 aaPredicted RBP14.19□□□□□ -0.14
GDE1-203ENST00000564172 C12orf54Q6X4T0 127 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 MOB3BQ86TA1 216 aa14.19□□□□□ -0.14
GDE1-203ENST00000564172 TBL2Q9Y4P3 447 aaKnown RBP14.19□□□□□ -0.14
GDE1-203ENST00000564172 H3BP45 60 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 RPS16P62249 146 aaKnown RBP14.18□□□□□ -0.14
GDE1-203ENST00000564172 TMEM267Q0VDI3 215 aaPredicted RBP14.18□□□□□ -0.14
GDE1-203ENST00000564172 SHISA2Q6UWI4 295 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 NRN1Q9NPD7 142 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 ABCA2Q9BZC7 2435 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 NAV2Q8IVL1 2488 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 SAA1P0DJI8 122 aaPredicted RBP14.18□□□□□ -0.14
GDE1-203ENST00000564172 PAX8Q06710 450 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 LRRC75A-AS1Q8N1F1 130 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 ZDHHC16Q969W1 377 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 ATP5SQ99766 215 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 PSENENQ9NZ42 101 aa14.18□□□□□ -0.14
GDE1-203ENST00000564172 TRAV9-2A0A087WT02 112 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 A0A1W2PPI3 338 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 C15orf61A6NNL5 157 aa14.17□□□□□ -0.14
GDE1-203ENST00000564172 FAM78BQ5VT40 261 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms