RNA–Protein interactions for RNA: ENST00000563836.1

SMG1-209, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-209ENST00000563836 IFITM2Q01629 132 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 ATP5G2Q06055 141 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 ARL16Q0P5N6 197 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 TMEM41BQ5BJD5 291 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 IL17RELQ6ZVW7 336 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 SIGLECL1Q8N7X8 197 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 NECAP1Q8NC96 275 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 OR2T6Q8NHC8 308 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 FAM213BQ8TBF2 198 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 BSCL2Q96G97 398 aaPredicted RBP6.43□□□□□ -1.38
SMG1-209ENST00000563836 TXN2Q99757 166 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 PBDC1Q9BVG4 233 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 ARV1Q9H2C2 271 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 WFDC1Q9HC57 220 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 SLC39A9Q9NUM3 307 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 TNCP24821 2201 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 ABCA1O95477 2261 aa6.43□□□□□ -1.38
SMG1-209ENST00000563836 UTP20O75691 2785 aaKnown RBP6.43□□□□□ -1.38
SMG1-209ENST00000563836 TENM4Q6N022 2769 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 TRBV7-1A0A0A6YYK4 115 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 FAM223BA6NKX1 122 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 E7EUB6 86 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 AGPAT2O15120 278 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 OR2J3O76001 311 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 IGF1P05019 195 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 M6PRP20645 277 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 RPL29P47914 159 aaKnown RBP6.42□□□□□ -1.38
SMG1-209ENST00000563836 PPT1P50897 306 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 RND2P52198 227 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 TAS2R45P59539 299 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 RPL15P61313 204 aaKnown RBP6.42□□□□□ -1.38
SMG1-209ENST00000563836 RHOBP62745 196 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 RUNX1Q01196 453 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 GAMTQ14353 236 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 CYP2G1PQ6ZSU1 146 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 HAPLN4Q86UW8 402 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 FAM223AQ8IWN6 122 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 COMMD1Q8N668 190 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 OR10G4Q8NGN3 311 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 OR10G9Q8NGN4 311 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 OR10G7Q8NGN6 311 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 OR4X1Q8NH49 305 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 PIFOQ8TCI5 191 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 VN1R17PQ8TDU5 208 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 Q8WTZ3 238 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 NPIPB3Q92617 1050 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 USMG5Q96IX5 58 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 HSPB9Q9BQS6 159 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 RSG1Q9BU20 258 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 C21orf62Q9NYP8 219 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 PXMP4Q9Y6I8 212 aa6.42□□□□□ -1.38
SMG1-209ENST00000563836 ABCA12Q86UK0 2595 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 DCHS2Q6V1P9 2916 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 TCRBV4S1A1TA0A5B7 111 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 COX7A2P2O60397 106 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 CLN5O75503 358 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 TRGV3P03979 118 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 OR10J1P30954 320 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 CDC34P49427 236 aaPredicted RBP6.41□□□□□ -1.38
SMG1-209ENST00000563836 CRIP2P52943 208 aaPredicted RBP6.41□□□□□ -1.38
SMG1-209ENST00000563836 TPPP2P59282 170 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 MRGPRG-AS1Q2M3A8 158 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 FAM74A1Q5RGS3 127 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 CENPVQ7Z7K6 275 aaPredicted RBP6.41□□□□□ -1.38
SMG1-209ENST00000563836 TMEM116Q8NCL8 245 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 GLMPQ8WWB7 406 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 RPL36ALQ969Q0 106 aaKnown RBP6.41□□□□□ -1.38
SMG1-209ENST00000563836 NARS2Q96I59 477 aaKnown RBP6.41□□□□□ -1.38
SMG1-209ENST00000563836 TRGV9Q99603 122 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 SH3BGRL3Q9H299 93 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 GNB4Q9HAV0 340 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
SMG1-209ENST00000563836 GCN1Q92616 2671 aaKnown RBP6.4□□□□□ -1.38
SMG1-209ENST00000563836 IGLV11-55A0A075B6I3 123 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 IGHV3-21A0A0B4J1V1 117 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 CTXND1A0A1B0GTU2 59 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 TMEM89A2RUT3 159 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 PSMB11A5LHX3 300 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 SH2D7A6NKC9 451 aaPredicted RBP6.4□□□□□ -1.38
SMG1-209ENST00000563836 PRSS46E5RG02 174 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 LY6G6DO95868 133 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 OR5G3P0C626 314 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 TAGLN2P37802 199 aaKnown RBP6.4□□□□□ -1.38
SMG1-209ENST00000563836 BLCAPP62952 87 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 RHOGP84095 191 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 NDPQ00604 133 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 C15orf32Q32M92 178 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 FAM122CQ6P4D5 195 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 TEX38Q6PEX7 206 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 IL34Q6ZMJ4 242 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 GATAD1Q8WUU5 269 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 SFT2D1Q8WV19 159 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 ZNF48Q96MX3 618 aaPredicted RBP6.4□□□□□ -1.38
SMG1-209ENST00000563836 MS4A10Q96PG2 267 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 ATP6V0BQ99437 205 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 MGST2Q99735 147 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 GGTLC1Q9BX51 225 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 MRPL32Q9BYC8 188 aaKnown RBP6.4□□□□□ -1.38
SMG1-209ENST00000563836 HRH4Q9H3N8 390 aa6.4□□□□□ -1.38
SMG1-209ENST00000563836 SOX21Q9Y651 276 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms