RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 OR1B1Q8NGR6 318 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 USMG5Q96IX5 58 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 C19orf24Q9BVV8 132 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 KLK15Q9H2R5 256 aa17.07■□□□□ 0.32
LINC01960-201ENST00000563759 TRAV1-1A0A0B4J248 108 aa17.06■□□□□ 0.32
LINC01960-201ENST00000563759 OR5G3P0C626 314 aa17.06■□□□□ 0.32
LINC01960-201ENST00000563759 ORM2P19652 201 aa17.06■□□□□ 0.32
LINC01960-201ENST00000563759 CLEC19AQ6UXS0 136 aa17.06■□□□□ 0.32
LINC01960-201ENST00000563759 GATAD1Q8WUU5 269 aa17.06■□□□□ 0.32
LINC01960-201ENST00000563759 JMJD8Q96S16 334 aa17.06■□□□□ 0.32
LINC01960-201ENST00000563759 TOMM40O96008 361 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 CLEC3BP05452 202 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 RAB9AP51151 201 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 YPEL3P61236 119 aaPredicted RBP17.05■□□□□ 0.32
LINC01960-201ENST00000563759 LYZP61626 148 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 C10orf113Q5VZT2 155 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 LCNL1Q6ZST4 164 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 COMMD1Q8N668 190 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 OR51G1Q8NGK1 321 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 TMEM37Q8WXS4 190 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 DNAJC4Q9NNZ3 241 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 FN1P02751 2386 aaKnown RBP17.05■□□□□ 0.32
LINC01960-201ENST00000563759 A0A0G2JLM5 398 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 CTSGP08311 255 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 PSMB8P28062 276 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 RPL15P61313 204 aaKnown RBP17.05■□□□□ 0.32
LINC01960-201ENST00000563759 SPATA31B1PQ5VZV4 182 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 C10orf99Q6UWK7 81 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 IQCF2Q8IXL9 164 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 PBDC1Q9BVG4 233 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 GNB4Q9HAV0 340 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 FUT9Q9Y231 359 aa17.05■□□□□ 0.32
LINC01960-201ENST00000563759 ELOA3CA0A087WX78 387 aaPredicted RBP17.04■□□□□ 0.32
LINC01960-201ENST00000563759 CCL20P78556 96 aa17.04■□□□□ 0.32
LINC01960-201ENST00000563759 TEX38Q6PEX7 206 aa17.04■□□□□ 0.32
LINC01960-201ENST00000563759 Q6ZSV7 163 aa17.04■□□□□ 0.32
LINC01960-201ENST00000563759 RNF2Q99496 336 aa17.04■□□□□ 0.32
LINC01960-201ENST00000563759 CHRDL1Q9BU40 450 aa17.04■□□□□ 0.32
LINC01960-201ENST00000563759 SERTAD4Q9NUC0 356 aa17.04■□□□□ 0.32
LINC01960-201ENST00000563759 TMEM89A2RUT3 159 aa17.03■□□□□ 0.32
LINC01960-201ENST00000563759 RAB19A4D1S5 217 aa17.03■□□□□ 0.32
LINC01960-201ENST00000563759 MIR17HGQ75NE6 70 aa17.03■□□□□ 0.32
LINC01960-201ENST00000563759 Q8WTZ3 238 aa17.03■□□□□ 0.32
LINC01960-201ENST00000563759 UHRF2Q96PU4 802 aa17.03■□□□□ 0.32
LINC01960-201ENST00000563759 MRPL32Q9BYC8 188 aaKnown RBP17.03■□□□□ 0.32
LINC01960-201ENST00000563759 HYPMO75409 117 aa17.03■□□□□ 0.32
LINC01960-201ENST00000563759 IGHV3-11P01762 117 aa17.03■□□□□ 0.32
LINC01960-201ENST00000563759 IL4P05112 153 aa17.03■□□□□ 0.32
LINC01960-201ENST00000563759 ATP6V0BQ99437 205 aa17.03■□□□□ 0.32
LINC01960-201ENST00000563759 TGOLN2O43493 480 aa17.02■□□□□ 0.32
LINC01960-201ENST00000563759 STAG3L2P0CL84 134 aa17.02■□□□□ 0.32
LINC01960-201ENST00000563759 STAG3L3P0CL85 134 aa17.02■□□□□ 0.32
LINC01960-201ENST00000563759 ARL14EPLP0DKL9 152 aa17.02■□□□□ 0.32
LINC01960-201ENST00000563759 ADMP35318 185 aa17.02■□□□□ 0.32
LINC01960-201ENST00000563759 PLP1P60201 277 aa17.02■□□□□ 0.32
LINC01960-201ENST00000563759 PATE2Q6UY27 113 aa17.02■□□□□ 0.32
LINC01960-201ENST00000563759 RNF125Q96EQ8 232 aa17.02■□□□□ 0.32
LINC01960-201ENST00000563759 TAS2R45P59539 299 aa17.01■□□□□ 0.31
LINC01960-201ENST00000563759 FOXE3Q13461 319 aa17.01■□□□□ 0.31
LINC01960-201ENST00000563759 LINC00305Q7Z4B0 112 aa17.01■□□□□ 0.31
LINC01960-201ENST00000563759 EIF4E3Q8N5X7 224 aaKnown RBP17.01■□□□□ 0.31
LINC01960-201ENST00000563759 GNG13Q9P2W3 67 aa17.01■□□□□ 0.31
LINC01960-201ENST00000563759 CXorf1O96002 111 aa17.01■□□□□ 0.31
LINC01960-201ENST00000563759 TOR2AQ5JU69 321 aa17.01■□□□□ 0.31
LINC01960-201ENST00000563759 EIF5A2Q9GZV4 153 aaKnown RBP17.01■□□□□ 0.31
LINC01960-201ENST00000563759 HIGD1AQ9Y241 93 aa17.01■□□□□ 0.31
LINC01960-201ENST00000563759 PUS1Q9Y606 427 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC01960-201ENST00000563759 IGHV3-35A0A0C4DH35 117 aa17■□□□□ 0.31
LINC01960-201ENST00000563759 CYSRT1A8MQ03 144 aa17■□□□□ 0.31
LINC01960-201ENST00000563759 PPP5D1E7EU14 171 aa17■□□□□ 0.31
LINC01960-201ENST00000563759 OR2C1O95371 312 aa17■□□□□ 0.31
LINC01960-201ENST00000563759 ELANEP08246 267 aa17■□□□□ 0.31
LINC01960-201ENST00000563759 KHDC3LQ587J8 217 aa17■□□□□ 0.31
LINC01960-201ENST00000563759 ZNF600Q6ZNG1 722 aa17■□□□□ 0.31
LINC01960-201ENST00000563759 ZNF491Q8N8L2 437 aa17■□□□□ 0.31
LINC01960-201ENST00000563759 TMPRSS5Q9H3S3 457 aa17■□□□□ 0.31
LINC01960-201ENST00000563759 TECRQ9NZ01 308 aaKnown RBP17■□□□□ 0.31
LINC01960-201ENST00000563759 ARL3P36405 182 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 GUK1Q16774 197 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 UQCC3Q6UW78 93 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 OR4X2Q8NGF9 303 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 TMEM231Q9H6L2 316 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 OR7C2O60412 319 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 IFNA1P01562 189 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 RPLP1P05386 114 aaKnown RBP16.99■□□□□ 0.31
LINC01960-201ENST00000563759 C8orf88P0DMB2 117 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 RELQ04864 619 aaPredicted RBP16.99■□□□□ 0.31
LINC01960-201ENST00000563759 HAGHQ16775 308 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 MORN5Q5VZ52 161 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 KLHDC1Q8N7A1 406 aa16.99■□□□□ 0.31
LINC01960-201ENST00000563759 NARS2Q96I59 477 aaKnown RBP16.99■□□□□ 0.31
LINC01960-201ENST00000563759 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.98■□□□□ 0.31
LINC01960-201ENST00000563759 WI2-2373I1.2A0A1W2PRP0 233 aa16.98■□□□□ 0.31
LINC01960-201ENST00000563759 ANKRD34BA5PLL1 514 aa16.98■□□□□ 0.31
LINC01960-201ENST00000563759 I3L521 148 aa16.98■□□□□ 0.31
LINC01960-201ENST00000563759 TCF21O43680 179 aa16.98■□□□□ 0.31
LINC01960-201ENST00000563759 CRLF1O75462 422 aa16.98■□□□□ 0.31
LINC01960-201ENST00000563759 SRSF3P84103 164 aaKnown RBP16.98■□□□□ 0.31
LINC01960-201ENST00000563759 TREM1Q9NP99 234 aa16.98■□□□□ 0.31
LINC01960-201ENST00000563759 USF2Q15853 346 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms