RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 PRKDCP78527 4128 aaKnown RBP3.35□□□□□ -1.87
LINC00254-201ENST00000563416 NOTCH1P46531 2555 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 A0A0A6YYH2 397 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 IGHV1-3A0A0C4DH29 117 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 IGKV1-6A0A0C4DH72 117 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 A6NJ64 397 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 MPDU1O75352 247 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 GABARAPO95166 117 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 IGHV3-7P01780 117 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 IL3RAP26951 378 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 PPP1CCP36873 323 aaKnown RBP3.34□□□□□ -1.87
LINC00254-201ENST00000563416 TGFBR1P36897 503 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 VDAC2P45880 294 aaPredicted RBP3.34□□□□□ -1.87
LINC00254-201ENST00000563416 RORCP51449 518 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 MXD1Q05195 221 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 EGFEM1PQ0D2K5 195 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 HERPUD1Q15011 391 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 CNIH2Q6PI25 160 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 ZNF833PQ6ZTB9 187 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 Q8N6K4 173 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 TMEM252Q8N6L7 170 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 OR4C13Q8NGP0 309 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 OR5H6Q8NGV6 325 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 OR10X1Q8NGY0 326 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 RPEQ96AT9 228 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 GALMQ96C23 342 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 CMSS1Q9BQ75 279 aaKnown RBP3.34□□□□□ -1.87
LINC00254-201ENST00000563416 ZNF251Q9BRH9 671 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 AGMATQ9BSE5 352 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 MRPS26Q9BYN8 205 aaKnown RBP3.34□□□□□ -1.87
LINC00254-201ENST00000563416 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 IFI27L2Q9H2X8 130 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 OR2S2Q9NQN1 319 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 RHBDL2Q9NX52 303 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 ABRACLQ9P1F3 81 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 XCL2Q9UBD3 114 aa3.34□□□□□ -1.87
LINC00254-201ENST00000563416 MEGF8Q7Z7M0 2845 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 TRBV6-7A0A0A0MS04 114 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 A6NDN8 102 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 TMEM235A6NFC5 223 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 F6UB75 175 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 M0QZK8 103 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 FABP7O15540 132 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 FGF16O43320 207 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 SCTP09683 121 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 CD3GP09693 182 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 SAA2P0DJI9 122 aaPredicted RBP3.33□□□□□ -1.88
LINC00254-201ENST00000563416 RAB4AP20338 218 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 DTYMKP23919 212 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 CD24P25063 80 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 REG1BP48304 166 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 SERPINB10P48595 397 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 NCS1P62166 190 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 BLCAPP62952 87 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 PITPNAQ00169 270 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 ARFRP1Q13795 201 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 KIR2DS1Q14954 304 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 C5orf64Q2M2E5 130 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 IDNKQ5T6J7 187 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 HACD4Q5VWC8 232 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 DRAM1Q8N682 238 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 C5orf56Q8N8D9 126 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 HSD17B11Q8NBQ5 300 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 OR1N2Q8NGR9 330 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 SGMS2Q8NHU3 365 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 SLC25A46Q96AG3 418 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 MRGPRFQ96AM1 343 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 VSIG2Q96IQ7 327 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 P2RX4Q99571 388 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 NABP2Q9BQ15 211 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 PARP12Q9H0J9 701 aaKnown RBP3.33□□□□□ -1.88
LINC00254-201ENST00000563416 ATG5Q9H1Y0 275 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 ABCG5Q9H222 651 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 DNAH9Q9NYC9 4486 aa3.33□□□□□ -1.88
LINC00254-201ENST00000563416 A0A0G2JLM5 398 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 ZNF736B4DX44 427 aaPredicted RBP3.32□□□□□ -1.88
LINC00254-201ENST00000563416 SMKR1H3BMG3 65 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 K7EMT4 169 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 SERF1AO75920 110 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 NDUFA3O95167 84 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 IGKV1D-33P01593 117 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 IGKV1-33P01594 117 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 IGHG2P01859 326 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 CEACAM6P40199 344 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 TAS2R19P59542 299 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 VBP1P61758 197 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 LSM3P62310 102 aaKnown RBP3.32□□□□□ -1.88
LINC00254-201ENST00000563416 MRPS15P82914 257 aaKnown RBP3.32□□□□□ -1.88
LINC00254-201ENST00000563416 ZNF726P1Q15940 193 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 CDNFQ49AH0 187 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 ABCA11PQ4W5N1 156 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 UBE2NLQ5JXB2 153 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 HSD17B13Q7Z5P4 300 aaPredicted RBP3.32□□□□□ -1.88
LINC00254-201ENST00000563416 VKORC1L1Q8N0U8 176 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 FAM71E2Q8N5Q1 922 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 Q8N9W7 124 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.32□□□□□ -1.88
LINC00254-201ENST00000563416 OR2T10Q8NGZ9 312 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 MAFIPQ8WZ33 124 aa3.32□□□□□ -1.88
LINC00254-201ENST00000563416 EEF1AKMT3Q96AZ1 226 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms