RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 TMEM190Q8WZ59 177 aa16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 RBM14Q96PK6 669 aaKnown RBP16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 GSX1Q9H4S2 264 aaPredicted RBP16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 LPAR2Q9HBW0 351 aa16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 TRAPPC1Q9Y5R8 145 aa16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 V9GYV3 84 aa16.9■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 TRAV30A0A087WSZ9 112 aa16.89■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 NBEAP1P0C6P0 100 aa16.89■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 CX3CL1P78423 397 aa16.89■□□□□ 0.3
VPS9D1-AS1-202ENST00000562866 HIVEP3Q5T1R4 2406 aa16.89■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 SLC17A3O00476 420 aa16.89■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 GP9P14770 177 aa16.89■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 BRS3P32247 399 aa16.89■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 TTC9CQ8N5M4 171 aa16.89■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 TBX15Q96SF7 602 aa16.89■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 FAM103A1Q9BTL3 118 aaKnown RBP16.89■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 GPR61Q9BZJ8 451 aa16.89■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 TMEM14CQ9P0S9 112 aa16.89■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 XKRY2A2RUG3 117 aa16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 IGKV1-17P01599 117 aa16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 IGLV2-8P01709 118 aa16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 RANP62826 216 aaKnown RBP16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 GFI1BQ5VTD9 330 aa16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 IGFBPL1Q8WX77 278 aa16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 ZNF48Q96MX3 618 aaPredicted RBP16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 EPDR1Q9UM22 224 aa16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 CHD8Q9HCK8 2581 aa16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 PLXNB1O43157 2135 aa16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 ZZEF1O43149 2961 aa16.88■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 MGST1P10620 155 aaKnown RBP16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 YPEL3P61236 119 aaPredicted RBP16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 S100A7AQ86SG5 101 aa16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 BLNKQ8WV28 456 aa16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 IGLV11-55A0A075B6I3 123 aa16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 TOMM40O96008 361 aa16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 IGHV4-39P01824 125 aa16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 SLC25A5P05141 298 aaKnown RBP16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 HIST1H1BP16401 226 aaKnown RBP16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 SLC25A39Q9BZJ4 359 aaPredicted RBP16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 THYN1Q9P016 225 aa16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 MRPL27Q9P0M9 148 aaKnown RBP16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 RNF24Q9Y225 148 aa16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 POLR3KQ9Y2Y1 108 aaPredicted RBP16.87■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 MFAP4P55083 255 aa16.86■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 TMEM183BQ1AE95 376 aa16.86■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 FBLN7Q53RD9 439 aa16.86■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 IBA57Q5T440 356 aaKnown RBP16.86■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 BAGE2Q86Y30 109 aa16.86■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 SMIM12Q96EX1 92 aa16.86■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 NIT2Q9NQR4 276 aa16.86■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 HRNRQ86YZ3 2850 aaPredicted RBP16.86■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 PGPA6NDG6 321 aa16.85■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 UBE2G1P62253 170 aa16.85■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 PDZD11Q5EBL8 140 aa16.85■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 ASPHD1Q5U4P2 390 aa16.85■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 C5orf17Q8NAS9 161 aa16.85■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 OR10D4PQ8NGN7 298 aa16.85■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 TMEM68Q96MH6 324 aa16.85■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 ARHGAP32A7KAX9 2087 aa16.85■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 TRBV9A0A0B4J1U6 114 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 SCGB2A1O75556 95 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 HIST1H1EP10412 219 aaKnown RBP16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 RNASE7Q9H1E1 156 aaKnown RBP16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 GNG7O60262 68 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 COX19Q49B96 90 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 ZNF600Q6ZNG1 722 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 FAM231DQ6ZW35 169 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 FANCD2OSQ96PS1 177 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 ATG101Q9BSB4 218 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 PIMREGQ9BSJ6 248 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 SHANK2-AS3Q9BTD1 123 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 CHRDL1Q9BU40 450 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 OTORQ9NRC9 128 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 KLF12Q9Y4X4 402 aa16.84■□□□□ 0.29
VPS9D1-AS1-202ENST00000562866 HLA-DRB1P01911 266 aa16.83■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 FABP4P15090 132 aa16.83■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 LINC00479Q96M42 142 aa16.83■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 CCL19Q99731 98 aa16.83■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 NPFFO15130 113 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 SAA4P35542 130 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 NDPQ00604 133 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 KLF17Q5JT82 389 aaPredicted RBP16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 LEMD1Q68G75 181 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 OR8I2Q8N0Y5 310 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 Q8N9W7 124 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 Q9H3A6 140 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 ITPR1Q14643 2758 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 GNG5P63218 68 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 RNF125Q96EQ8 232 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 FMC1Q96HJ9 113 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 AJUBAQ96IF1 538 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 HIST1H2BLQ99880 126 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 SERTAD4Q9NUC0 356 aa16.82■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 LRBAP50851 2863 aa16.81■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 IGHV7-81A0A0B4J1V7 117 aa16.81■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 TRAV34A0A0B4J273 112 aa16.81■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 WI2-2373I1.2A0A1W2PRP0 233 aa16.81■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 ZNF705GA8MUZ8 300 aaPredicted RBP16.81■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 H3BRN7 92 aa16.81■□□□□ 0.28
VPS9D1-AS1-202ENST00000562866 NDUFS8O00217 210 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms