RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 TSPAN4O14817 238 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 IGHV4-30-4P0DP06 118 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 PVALBP20472 110 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-202ENST00000561749 H2BFSP57053 126 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 LRRC37A5PQ49AS3 106 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 TCF24Q7RTU0 167 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 OR10P1Q8NGE3 313 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 TRGV9Q99603 122 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 ASCL2Q99929 193 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 B9D2Q9BPU9 175 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 PBDC1Q9BVG4 233 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 VSIRQ9H7M9 311 aa17.53■□□□□ 0.4
SMPD3-202ENST00000561749 DFFBO76075 338 aa17.52■□□□□ 0.4
SMPD3-202ENST00000561749 FRMD6-AS1P0C7T7 363 aa17.52■□□□□ 0.4
SMPD3-202ENST00000561749 CRYBB3P26998 211 aa17.52■□□□□ 0.4
SMPD3-202ENST00000561749 BMI1P35226 326 aa17.52■□□□□ 0.4
SMPD3-202ENST00000561749 TFPI2P48307 235 aa17.52■□□□□ 0.4
SMPD3-202ENST00000561749 DLK1P80370 383 aa17.52■□□□□ 0.4
SMPD3-202ENST00000561749 NMES1Q9C002 83 aa17.52■□□□□ 0.4
SMPD3-202ENST00000561749 CST7O76096 145 aa17.51■□□□□ 0.39
SMPD3-202ENST00000561749 HNRNPCP07910 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMPD3-202ENST00000561749 LYZP61626 148 aa17.51■□□□□ 0.39
SMPD3-202ENST00000561749 GBGT1Q8N5D6 347 aa17.51■□□□□ 0.39
SMPD3-202ENST00000561749 RNF125Q96EQ8 232 aa17.51■□□□□ 0.39
SMPD3-202ENST00000561749 SPAG8Q99932 426 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-202ENST00000561749 IGSF23A1L1A6 192 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 FABP1P07148 127 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 GATA2P23769 480 aaPredicted RBP17.5■□□□□ 0.39
SMPD3-202ENST00000561749 P2RY1P47900 373 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 RGS21Q2M5E4 152 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 FAM90A2PQ658T7 463 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 TMEM144Q7Z5S9 345 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 DEFB125Q8N687 156 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 NARS2Q96I59 477 aaKnown RBP17.5■□□□□ 0.39
SMPD3-202ENST00000561749 TMEM231Q9H6L2 316 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 UBQLN2Q9UHD9 624 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 RABAC1Q9UI14 185 aa17.5■□□□□ 0.39
SMPD3-202ENST00000561749 A0A1W2PS18 150 aa17.49■□□□□ 0.39
SMPD3-202ENST00000561749 OR11H12B2RN74 326 aa17.49■□□□□ 0.39
SMPD3-202ENST00000561749 DEDDO75618 318 aa17.49■□□□□ 0.39
SMPD3-202ENST00000561749 RPL11P62913 178 aaKnown RBP17.49■□□□□ 0.39
SMPD3-202ENST00000561749 TMEM182Q6ZP80 229 aaPredicted RBP17.49■□□□□ 0.39
SMPD3-202ENST00000561749 TMEM217Q8N7C4 229 aa17.49■□□□□ 0.39
SMPD3-202ENST00000561749 TUBA4BQ9H853 241 aa17.49■□□□□ 0.39
SMPD3-202ENST00000561749 LYRM2Q9NU23 88 aaPredicted RBP17.49■□□□□ 0.39
SMPD3-202ENST00000561749 OR5AC2Q9NZP5 309 aa17.49■□□□□ 0.39
SMPD3-202ENST00000561749 U3KQE9 123 aa17.49■□□□□ 0.39
SMPD3-202ENST00000561749 CYCSP99999 105 aaKnown RBP17.48■□□□□ 0.39
SMPD3-202ENST00000561749 SLC38A11Q08AI6 406 aa17.48■□□□□ 0.39
SMPD3-202ENST00000561749 WFDC3Q8IUB2 231 aa17.48■□□□□ 0.39
SMPD3-202ENST00000561749 C19orf73Q9NVV2 129 aa17.48■□□□□ 0.39
SMPD3-202ENST00000561749 OR4C46A6NHA9 309 aa17.47■□□□□ 0.39
SMPD3-202ENST00000561749 H0YIZ8 118 aa17.47■□□□□ 0.39
SMPD3-202ENST00000561749 TMEM252Q8N6L7 170 aa17.47■□□□□ 0.39
SMPD3-202ENST00000561749 GRAMD2BQ96HH9 432 aa17.47■□□□□ 0.39
SMPD3-202ENST00000561749 RLN2P04090 185 aa17.46■□□□□ 0.39
SMPD3-202ENST00000561749 EIF2B2P49770 351 aaKnown RBP17.46■□□□□ 0.39
SMPD3-202ENST00000561749 CYP2G1PQ6ZSU1 146 aa17.46■□□□□ 0.39
SMPD3-202ENST00000561749 SBSPONQ8IVN8 264 aa17.46■□□□□ 0.39
SMPD3-202ENST00000561749 PPP1R1CQ8WVI7 109 aa17.46■□□□□ 0.39
SMPD3-202ENST00000561749 SRD5A3Q9H8P0 318 aa17.46■□□□□ 0.39
SMPD3-202ENST00000561749 NPVFQ9HCQ7 196 aa17.46■□□□□ 0.39
SMPD3-202ENST00000561749 FNDC10F2Z333 226 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 CXCL3P19876 107 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 SULT1A1P50225 295 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 FCN2Q15485 313 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 C16orf54Q6UWD8 224 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 BPIFCQ8NFQ6 507 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 GLMPQ8WWB7 406 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 MED28Q9H204 178 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 MS4A6AQ9H2W1 248 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 TGP01266 2768 aa17.45■□□□□ 0.38
SMPD3-202ENST00000561749 A8MZ25 164 aa17.44■□□□□ 0.38
SMPD3-202ENST00000561749 E5RGE8 158 aa17.44■□□□□ 0.38
SMPD3-202ENST00000561749 DNASE2O00115 360 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-202ENST00000561749 ODF3L2Q3SX64 289 aa17.44■□□□□ 0.38
SMPD3-202ENST00000561749 STX12Q86Y82 276 aa17.44■□□□□ 0.38
SMPD3-202ENST00000561749 STPG3Q8N7X2 389 aa17.44■□□□□ 0.38
SMPD3-202ENST00000561749 STXBP6Q8NFX7 210 aa17.44■□□□□ 0.38
SMPD3-202ENST00000561749 PPP1R14BQ96C90 147 aa17.44■□□□□ 0.38
SMPD3-202ENST00000561749 GGACTQ9BVM4 153 aa17.44■□□□□ 0.38
SMPD3-202ENST00000561749 BUB3O43684 328 aa17.43■□□□□ 0.38
SMPD3-202ENST00000561749 CD5P06127 495 aa17.43■□□□□ 0.38
SMPD3-202ENST00000561749 ORM2P19652 201 aa17.43■□□□□ 0.38
SMPD3-202ENST00000561749 PAFAH1B2P68402 229 aa17.43■□□□□ 0.38
SMPD3-202ENST00000561749 OXA1LQ15070 435 aa17.43■□□□□ 0.38
SMPD3-202ENST00000561749 TEPPQ6URK8 271 aa17.43■□□□□ 0.38
SMPD3-202ENST00000561749 DOK5Q9P104 306 aa17.43■□□□□ 0.38
SMPD3-202ENST00000561749 MPC2O95563 127 aa17.42■□□□□ 0.38
SMPD3-202ENST00000561749 OR11H7Q8NGC8 314 aa17.42■□□□□ 0.38
SMPD3-202ENST00000561749 OR1B1Q8NGR6 318 aa17.42■□□□□ 0.38
SMPD3-202ENST00000561749 RNF126Q9BV68 326 aa17.42■□□□□ 0.38
SMPD3-202ENST00000561749 RBMY1BA6NDE4 496 aaKnown RBP17.41■□□□□ 0.38
SMPD3-202ENST00000561749 RBMY1EA6NEQ0 496 aaKnown RBP17.41■□□□□ 0.38
SMPD3-202ENST00000561749 CFDP00746 253 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-202ENST00000561749 RBMY1DP0C7P1 496 aaKnown RBP17.41■□□□□ 0.38
SMPD3-202ENST00000561749 NHLH2Q02577 135 aa17.41■□□□□ 0.38
SMPD3-202ENST00000561749 FAM24BQ8N5W8 94 aa17.41■□□□□ 0.38
SMPD3-202ENST00000561749 CITED4Q96RK1 184 aa17.41■□□□□ 0.38
SMPD3-202ENST00000561749 UQCC1Q9NVA1 299 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms