RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 RBFOX3A6NFN3 312 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 LINC01548A6NM66 108 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 C9JQL5 133 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 HMGB3O15347 200 aaKnown RBP5.88□□□□□ -1.47
TPM1-231ENST00000561395 EIF3GO75821 320 aaKnown RBP eCLIP5.88□□□□□ -1.47
TPM1-231ENST00000561395 GHRHP01286 108 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 IGHV4-59P01825 116 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 OR5G3P0C626 314 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 SFTA3P0C7M3 94 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 ADCYAP1P18509 176 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 GATA2P23769 480 aaPredicted RBP5.88□□□□□ -1.47
TPM1-231ENST00000561395 IER3P46695 156 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 RHOBP62745 196 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 ZNF90Q03938 601 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 PMS2P11Q13670 270 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 ICAM4Q14773 271 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 PEA15Q15121 130 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 ECSCRQ19T08 205 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 AKIRIN2Q53H80 203 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 C19orf54Q5BKX5 351 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 ZNF506Q5JVG8 444 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 UNQ5815/PRO19632Q6UWF5 114 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 OR5T1Q8NG75 326 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 OR5R1Q8NH85 324 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 TMEM68Q96MH6 324 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 ZNF48Q96MX3 618 aaPredicted RBP5.88□□□□□ -1.47
TPM1-231ENST00000561395 EIF5A2Q9GZV4 153 aaKnown RBP5.88□□□□□ -1.47
TPM1-231ENST00000561395 SMDT1Q9H4I9 107 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 ESM1Q9NQ30 184 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 TNFRSF19Q9NS68 423 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 GNG13Q9P2W3 67 aa5.88□□□□□ -1.47
TPM1-231ENST00000561395 PSMB11A5LHX3 300 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 M0QZ24 198 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 CLN5O75503 358 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 NDUFB8O95169 186 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 IFNA1P01562 189 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 IGHG2P01859 326 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 IGLC1P0CG04 106 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 STAG3L2P0CL84 134 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 STAG3L3P0CL85 134 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 ARL14EPLP0DKL9 152 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 BCL2P10415 239 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 HIST1H1BP16401 226 aaKnown RBP5.87□□□□□ -1.47
TPM1-231ENST00000561395 HAGHQ16775 308 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 C10orf91Q5T1B1 145 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 SPATA31B1PQ5VZV4 182 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 RARRES2Q99969 163 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 TMPRSS5Q9H3S3 457 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 PRDM13Q9H4Q3 707 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 MANBALQ9NQG1 85 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 THYN1Q9P016 225 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 FUT9Q9Y231 359 aa5.87□□□□□ -1.47
TPM1-231ENST00000561395 TRBV9A0A0B4J1U6 114 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 TRAV41A0A0B4J266 112 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 F8W036 122 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 F8W735 103 aaPredicted RBP5.86□□□□□ -1.47
TPM1-231ENST00000561395 G3V318 75 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 COX7A2P2O60397 106 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 OR2J3O76001 311 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 CXorf1O96002 111 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 IGKV1-17P01599 117 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 HSPB1P04792 205 aaKnown RBP5.86□□□□□ -1.47
TPM1-231ENST00000561395 IGF1P05019 195 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 FCGR2BP31994 310 aaPredicted RBP5.86□□□□□ -1.47
TPM1-231ENST00000561395 TAGLN2P37802 199 aaKnown RBP5.86□□□□□ -1.47
TPM1-231ENST00000561395 NPBWR1P48145 328 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 PSMB3P49720 205 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 PPT1P50897 306 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 MFAP4P55083 255 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 TIGITQ495A1 244 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 KHDC3LQ587J8 217 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 C9orf152Q5JTZ5 239 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
TPM1-231ENST00000561395 FAM78BQ5VT40 261 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 Q6YL49 198 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 MIR17HGQ75NE6 70 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 SLC35E3Q7Z769 313 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 OR1L4Q8NGR5 311 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 VN1R17PQ8TDU5 208 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 RXFP4Q8TDU9 374 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 GATAD1Q8WUU5 269 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 PFDN5Q99471 154 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 RNF2Q99496 336 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 SEC11CQ9BY50 192 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 MRPL32Q9BYC8 188 aaKnown RBP5.86□□□□□ -1.47
TPM1-231ENST00000561395 SLC35B3Q9H1N7 401 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 SEPSECSQ9HD40 501 aaKnown RBP5.86□□□□□ -1.47
TPM1-231ENST00000561395 DNAJC4Q9NNZ3 241 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 FBXL7Q9UJT9 491 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 ZNF580Q9UK33 172 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 VPREB3Q9UKI3 123 aa5.86□□□□□ -1.47
TPM1-231ENST00000561395 CARHSP1Q9Y2V2 147 aaKnown RBP5.86□□□□□ -1.47
TPM1-231ENST00000561395 TRAV30A0A087WSZ9 112 aa5.85□□□□□ -1.47
TPM1-231ENST00000561395 ELOA3CA0A087WX78 387 aaPredicted RBP5.85□□□□□ -1.47
TPM1-231ENST00000561395 AP4M1O00189 453 aa5.85□□□□□ -1.47
TPM1-231ENST00000561395 NDUFS6O75380 124 aaKnown RBP5.85□□□□□ -1.47
TPM1-231ENST00000561395 APOC3P02656 99 aa5.85□□□□□ -1.47
TPM1-231ENST00000561395 FABP1P07148 127 aa5.85□□□□□ -1.47
TPM1-231ENST00000561395 SRP19P09132 144 aaKnown RBP5.85□□□□□ -1.47
TPM1-231ENST00000561395 GCHFRP30047 84 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms