RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CRLF1O75462 422 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 IGKV1-17P01599 117 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 IGHV3-23P01764 117 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 CTSGP08311 255 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 PSG1P11464 419 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 GATA2P23769 480 aaPredicted RBP8.02□□□□□ -1.13
USP3-219ENST00000561326 TAS2R45P59539 299 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 PLP1P60201 277 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 RELQ04864 619 aaPredicted RBP8.02□□□□□ -1.13
USP3-219ENST00000561326 TMEM95Q3KNT9 176 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 FAM78BQ5VT40 261 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 LCN15Q6UWW0 184 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 CLEC19AQ6UXS0 136 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 ZNF329Q86UD4 541 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 COMMD7Q86VX2 200 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 PBDC1Q9BVG4 233 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 MRPL32Q9BYC8 188 aaKnown RBP8.02□□□□□ -1.13
USP3-219ENST00000561326 MAP1LC3BQ9GZQ8 125 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 SERTAD4Q9NUC0 356 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 RNF24Q9Y225 148 aa8.02□□□□□ -1.13
USP3-219ENST00000561326 NSD1Q96L73 2696 aaPredicted RBP8.01□□□□□ -1.13
USP3-219ENST00000561326 CXorf1O96002 111 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 IFNA1P01562 189 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 ORM2P19652 201 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 PSMB8P28062 276 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 GPR183P32249 361 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 PPT1P50897 306 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 GCSAMLQ5JQS6 135 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 ZNF600Q6ZNG1 722 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 Q6ZSV7 163 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 OR1B1Q8NGR6 318 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 KLK15Q9H2R5 256 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 SLC25A22Q9H936 323 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 TECRQ9NZ01 308 aaKnown RBP8.01□□□□□ -1.13
USP3-219ENST00000561326 FUT9Q9Y231 359 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 HIGD1AQ9Y241 93 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 F8P00451 2351 aa8.01□□□□□ -1.13
USP3-219ENST00000561326 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8□□□□□ -1.13
USP3-219ENST00000561326 A0A1B0GV50 99 aa8□□□□□ -1.13
USP3-219ENST00000561326 F8W735 103 aaPredicted RBP8□□□□□ -1.13
USP3-219ENST00000561326 TGOLN2O43493 480 aa8□□□□□ -1.13
USP3-219ENST00000561326 OR2C1O95371 312 aa8□□□□□ -1.13
USP3-219ENST00000561326 C8orf88P0DMB2 117 aa8□□□□□ -1.13
USP3-219ENST00000561326 TAGLN2P37802 199 aaKnown RBP8□□□□□ -1.13
USP3-219ENST00000561326 LYZP61626 148 aa8□□□□□ -1.13
USP3-219ENST00000561326 DEFA5Q01523 94 aa8□□□□□ -1.13
USP3-219ENST00000561326 PEA15Q15121 130 aa8□□□□□ -1.13
USP3-219ENST00000561326 ZNF726P1Q15940 193 aa8□□□□□ -1.13
USP3-219ENST00000561326 KHDC3LQ587J8 217 aa8□□□□□ -1.13
USP3-219ENST00000561326 ZNF343Q6P1L6 599 aa8□□□□□ -1.13
USP3-219ENST00000561326 UQCC3Q6UW78 93 aa8□□□□□ -1.13
USP3-219ENST00000561326 EIF4E3Q8N5X7 224 aaKnown RBP8□□□□□ -1.13
USP3-219ENST00000561326 KLHDC1Q8N7A1 406 aa8□□□□□ -1.13
USP3-219ENST00000561326 STXBP6Q8NFX7 210 aa8□□□□□ -1.13
USP3-219ENST00000561326 OR4X2Q8NGF9 303 aa8□□□□□ -1.13
USP3-219ENST00000561326 RNF125Q96EQ8 232 aa8□□□□□ -1.13
USP3-219ENST00000561326 CITED4Q96RK1 184 aa8□□□□□ -1.13
USP3-219ENST00000561326 C16orf95Q9H693 158 aa8□□□□□ -1.13
USP3-219ENST00000561326 GNB4Q9HAV0 340 aa8□□□□□ -1.13
USP3-219ENST00000561326 WI2-2373I1.2A0A1W2PRP0 233 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 ANKRD34BA5PLL1 514 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 BMPR1BO00238 502 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 HMGB3O15347 200 aaKnown RBP7.99□□□□□ -1.13
USP3-219ENST00000561326 NDUFA7O95182 113 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 IL4P05112 153 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 STAG3L2P0CL84 134 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 STAG3L3P0CL85 134 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 ARL3P36405 182 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 PSMB3P49720 205 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 FGF8P55075 233 aaPredicted RBP7.99□□□□□ -1.13
USP3-219ENST00000561326 PMS2P11Q13670 270 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 PQLC2Q6ZP29 291 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 LINC00305Q7Z4B0 112 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 IQCF2Q8IXL9 164 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 ZNF491Q8N8L2 437 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 RNF152Q8N8N0 203 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 OR5AU1Q8NGC0 362 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 OR4F5Q8NH21 305 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 TMEM37Q8WXS4 190 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 UBE2E2Q96LR5 201 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 CCDC140Q96MF4 163 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 CHRDL1Q9BU40 450 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 EIF5A2Q9GZV4 153 aaKnown RBP7.99□□□□□ -1.13
USP3-219ENST00000561326 SMDT1Q9H4I9 107 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 SEPSECSQ9HD40 501 aaKnown RBP7.99□□□□□ -1.13
USP3-219ENST00000561326 DOK5Q9P104 306 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 PEF1Q9UBV8 284 aaKnown RBP7.99□□□□□ -1.13
USP3-219ENST00000561326 ZFHX3Q15911 3703 aa7.99□□□□□ -1.13
USP3-219ENST00000561326 ANK3Q12955 4377 aaKnown RBP7.98□□□□□ -1.13
USP3-219ENST00000561326 RBFOX3A6NFN3 312 aa7.98□□□□□ -1.13
USP3-219ENST00000561326 GGCTO75223 188 aaKnown RBP7.98□□□□□ -1.13
USP3-219ENST00000561326 CCL20P78556 96 aa7.98□□□□□ -1.13
USP3-219ENST00000561326 GUK1Q16774 197 aa7.98□□□□□ -1.13
USP3-219ENST00000561326 PATE2Q6UY27 113 aa7.98□□□□□ -1.13
USP3-219ENST00000561326 MIR17HGQ75NE6 70 aa7.98□□□□□ -1.13
USP3-219ENST00000561326 FAM210AQ96ND0 272 aa7.98□□□□□ -1.13
USP3-219ENST00000561326 MANBALQ9NQG1 85 aa7.98□□□□□ -1.13
USP3-219ENST00000561326 TMEM167BQ9NRX6 74 aa7.98□□□□□ -1.13
USP3-219ENST00000561326 MRPL27Q9P0M9 148 aaKnown RBP7.98□□□□□ -1.13
USP3-219ENST00000561326 GNG13Q9P2W3 67 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms