RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 CD7P09564 240 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 CGB3P0DN86 165 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 CGB7P0DN87 165 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 IL9P15248 144 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 GPX2P18283 190 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 RPS4Y1P22090 263 aaKnown RBP2.23□□□□□ -2.05
LRRC28-212ENST00000558911 RPS3P23396 243 aaKnown RBP eCLIP2.23□□□□□ -2.05
LRRC28-212ENST00000558911 BLVRBP30043 206 aaPredicted RBP2.23□□□□□ -2.05
LRRC28-212ENST00000558911 CA5AP35218 305 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 OPRK1P41145 380 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 PIGPP57054 158 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 FGF12P61328 243 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 HBA1P69905 142 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 DHRS2Q13268 280 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 ZFAND6Q6FIF0 208 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 GPHB5Q86YW7 130 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 AMN1Q8IY45 258 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 LINC01560Q8TB33 94 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 THEM6Q8WUY1 208 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 ACOT12Q8WYK0 555 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 OR5P3Q8WZ94 311 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 SLC7A6Q92536 515 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 RBPMSQ93062 196 aaKnown RBP2.23□□□□□ -2.05
LRRC28-212ENST00000558911 CMBLQ96DG6 245 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 STARD4Q96DR4 205 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 IMMP1LQ96LU5 166 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 PEBP4Q96S96 227 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 SPIN2AQ99865 258 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 SPIN2BQ9BPZ2 258 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 HSPB9Q9BQS6 159 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 VPS25Q9BRG1 176 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 DOHHQ9BU89 302 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 PBOV1Q9GZY1 135 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 ZNF355PQ9NSJ1 428 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 ZNF586Q9NXT0 402 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 COPZ2Q9P299 210 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 TP73-AS1Q9UF72 201 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 AMMECR1Q9Y4X0 333 aaPredicted RBP2.23□□□□□ -2.05
LRRC28-212ENST00000558911 PHLDA3Q9Y5J5 127 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 BTAF1O14981 1849 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 ZNF469Q96JG9 3925 aaPredicted RBP2.23□□□□□ -2.05
LRRC28-212ENST00000558911 KMT2AQ03164 3969 aa2.23□□□□□ -2.05
LRRC28-212ENST00000558911 TDRD6O60522 2096 aaKnown RBP2.22□□□□□ -2.05
LRRC28-212ENST00000558911 PTPRJQ12913 1337 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 IGSF9BQ9UPX0 1349 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 MED13Q9UHV7 2174 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 SHANK1Q9Y566 2161 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 OTOFQ9HC10 1997 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 IGHV3OR15-7A0A075B7D8 119 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 IGKV1D-43A0A0B4J1Z2 117 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 IGHV1-3A0A0C4DH29 117 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 LOC102725191A0A1B0GVB3 256 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ZNF98A6NK75 572 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 PHOX2AO14813 284 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 CST8O60676 142 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ZNF324O75467 553 aaPredicted RBP2.22□□□□□ -2.05
LRRC28-212ENST00000558911 NRASP01111 189 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 HRASP01112 189 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 KRASP01116 189 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 TRGV3P03979 118 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ZNF705DP0CH99 300 aaPredicted RBP2.22□□□□□ -2.05
LRRC28-212ENST00000558911 RAB13P51153 203 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 POLR2HP52434 150 aaKnown RBP2.22□□□□□ -2.05
LRRC28-212ENST00000558911 HOXC5Q00444 222 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ENDOGQ14249 297 aaKnown RBP2.22□□□□□ -2.05
LRRC28-212ENST00000558911 Q6Q795 121 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 SCXQ7RTU7 201 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ADM2Q7Z4H4 148 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 WDR86Q86TI4 376 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 H1FOOQ8IZA3 346 aaPredicted RBP2.22□□□□□ -2.05
LRRC28-212ENST00000558911 DAND5Q8N907 189 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 OR9Q1Q8NGQ5 310 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ZNF799Q96GE5 643 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ZNF285Q96NJ3 590 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 PLA2G2FQ9BZM2 168 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 GABARAPL1Q9H0R8 117 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 EFCAB1Q9HAE3 211 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 TPT1P8Q9HAU6 139 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 FAM60AQ9NP50 221 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 TVP23BQ9NYZ1 205 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 PCTPQ9UKL6 214 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 MAST2Q6P0Q8 1798 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 UBR2Q8IWV8 1755 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ANKRD12Q6UB98 2062 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 DSCAML1Q8TD84 2053 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 NLRC5Q86WI3 1866 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 NUP205Q92621 2012 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ROCK2O75116 1388 aaKnown RBP2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ARHGAP5Q13017 1502 aa2.22□□□□□ -2.05
LRRC28-212ENST00000558911 ECM29Q5VYK3 1845 aa2.21□□□□□ -2.05
LRRC28-212ENST00000558911 TRAV36DV7A0A075B6V5 113 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 TRAV41A0A0B4J266 112 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 A6NED7 52 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 A8MWP4 228 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 IGLL5B9A064 214 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 C5orf58C9J3I9 102 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 C9JCJ5 164 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 TRAPPC2LH3BP13 241 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 I3L521 148 aa2.21□□□□□ -2.06
LRRC28-212ENST00000558911 GADD45GO95257 159 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms