RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SPANXN5Q5MJ07 72 aa8.91□□□□□ -0.98
TPM1-216ENST00000558910 ETFRF1Q6IPR1 90 aa8.91□□□□□ -0.98
TPM1-216ENST00000558910 NOXA1Q86UR1 476 aa8.91□□□□□ -0.98
TPM1-216ENST00000558910 OR51G1Q8NGK1 321 aa8.91□□□□□ -0.98
TPM1-216ENST00000558910 OR1S2Q8NGQ3 325 aa8.91□□□□□ -0.98
TPM1-216ENST00000558910 NARS2Q96I59 477 aaKnown RBP8.91□□□□□ -0.98
TPM1-216ENST00000558910 SLC35E1Q96K37 410 aa8.91□□□□□ -0.98
TPM1-216ENST00000558910 GSKIPQ9P0R6 139 aa8.91□□□□□ -0.98
TPM1-216ENST00000558910 TRAV30A0A087WSZ9 112 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 SMCO3A2RU48 225 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 FAM25EA8MYX2 175 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 CCSO14618 274 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 PLA2G10O15496 165 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 RD3LP0DJH9 198 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 DEFB131AP59861 70 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 POLR2GP62487 172 aaKnown RBP eCLIP8.9□□□□□ -0.98
TPM1-216ENST00000558910 RAB11AP62491 216 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 ZNF90Q03938 601 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 DHRS2Q13268 280 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 CNPY1Q3B7I2 92 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 LYG2Q86SG7 212 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 COQ8AQ8NI60 647 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 TMEM231Q9H6L2 316 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 MAP6D1Q9H9H5 199 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 TMED3Q9Y3Q3 217 aa8.9□□□□□ -0.98
TPM1-216ENST00000558910 DUXBA0A1W2PPF3 345 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 A0A1W2PS18 150 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 C3orf84H3BNL1 204 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 LYRM1O43325 122 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 SYNGR2O43760 224 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 SSSCA1O60232 199 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 PITX3O75364 302 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 MED6O75586 246 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 IFNA21P01568 189 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 HNRNPCP07910 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
TPM1-216ENST00000558910 ZNF688P0C7X2 276 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 PSG1P11464 419 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 LYZP61626 148 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 GAMTQ14353 236 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 USF2Q15853 346 aaPredicted RBP8.89□□□□□ -0.99
TPM1-216ENST00000558910 CASC10Q5T4H9 136 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 FAM90A2PQ658T7 463 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 OR8G2PQ6IF36 304 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 SEC22CQ9BRL7 303 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 C20orf85Q9H1P6 137 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 VSIRQ9H7M9 311 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 EDA2RQ9HAV5 297 aa8.89□□□□□ -0.99
TPM1-216ENST00000558910 KNCNA6PVL3 124 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 APOC4P55056 127 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
TPM1-216ENST00000558910 STPG3Q8N7X2 389 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 LRTM2Q8N967 370 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 DEDD2Q8WXF8 326 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 PPP1R14BQ96C90 147 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 GRAMD2BQ96HH9 432 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 OVOL2Q9BRP0 275 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 PSENENQ9NZ42 101 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 CACFD1Q9UGQ2 172 aa8.88□□□□□ -0.99
TPM1-216ENST00000558910 STARD9Q9P2P6 4700 aa8.87□□□□□ -0.99
TPM1-216ENST00000558910 DYNC2H1Q8NCM8 4307 aaKnown RBP8.87□□□□□ -0.99
TPM1-216ENST00000558910 TOMM40O96008 361 aa8.87□□□□□ -0.99
TPM1-216ENST00000558910 GATA2P23769 480 aaPredicted RBP8.87□□□□□ -0.99
TPM1-216ENST00000558910 CRYBB3P26998 211 aa8.87□□□□□ -0.99
TPM1-216ENST00000558910 NKX2-1P43699 371 aaPredicted RBP8.87□□□□□ -0.99
TPM1-216ENST00000558910 YPEL3P61236 119 aaPredicted RBP8.87□□□□□ -0.99
TPM1-216ENST00000558910 AKR1C1Q04828 323 aa8.87□□□□□ -0.99
TPM1-216ENST00000558910 PMS2P11Q13670 270 aa8.87□□□□□ -0.99
TPM1-216ENST00000558910 IAH1Q2TAA2 248 aaPredicted RBP8.87□□□□□ -0.99
TPM1-216ENST00000558910 C7orf50Q9BRJ6 194 aaKnown RBP8.87□□□□□ -0.99
TPM1-216ENST00000558910 STRAPQ9Y3F4 350 aaKnown RBP8.87□□□□□ -0.99
TPM1-216ENST00000558910 PIGBOS1A0A0B4J2F0 54 aa8.86□□□□□ -0.99
TPM1-216ENST00000558910 A0A0J9YWU9 116 aa8.86□□□□□ -0.99
TPM1-216ENST00000558910 SPRY2O43597 315 aa8.86□□□□□ -0.99
TPM1-216ENST00000558910 CCNKO75909 580 aa8.86□□□□□ -0.99
TPM1-216ENST00000558910 TCRBP04435 133 aa8.86□□□□□ -0.99
TPM1-216ENST00000558910 RPP30P78346 268 aaKnown RBP8.86□□□□□ -0.99
TPM1-216ENST00000558910 PSMG4Q5JS54 123 aa8.86□□□□□ -0.99
TPM1-216ENST00000558910 RNF125Q96EQ8 232 aa8.86□□□□□ -0.99
TPM1-216ENST00000558910 BATF3Q9NR55 127 aa8.86□□□□□ -0.99
TPM1-216ENST00000558910 NUDT15Q9NV35 164 aa8.86□□□□□ -0.99
TPM1-216ENST00000558910 IGKV1D-37A0A075B6S9 117 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 FAM240BA0A1B0GVZ2 78 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 C5orf51A6NDU8 294 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 FAM90A26D6RGX4 464 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 CA1P00915 261 aaPredicted RBP8.85□□□□□ -0.99
TPM1-216ENST00000558910 SLC25A6P12236 298 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 GPX4P36969 197 aaPredicted RBP8.85□□□□□ -0.99
TPM1-216ENST00000558910 ACTL10Q5JWF8 245 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 C16orf54Q6UWD8 224 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 ACOT7LQ6ZUV0 252 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 STHQ8IWL8 128 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 ZBTB8BQ8NAP8 495 aaPredicted RBP8.85□□□□□ -0.99
TPM1-216ENST00000558910 CIB3Q96Q77 187 aaPredicted RBP8.85□□□□□ -0.99
TPM1-216ENST00000558910 CSTL1Q9H114 145 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 DOK5Q9P104 306 aa8.85□□□□□ -0.99
TPM1-216ENST00000558910 RCL1Q9Y2P8 373 aaKnown RBP8.85□□□□□ -0.99
TPM1-216ENST00000558910 LSM5Q9Y4Y9 91 aaKnown RBP8.85□□□□□ -0.99
TPM1-216ENST00000558910 RGS13O14921 159 aa8.84□□□□□ -0.99
TPM1-216ENST00000558910 DEFB4AO15263 64 aa8.84□□□□□ -0.99
TPM1-216ENST00000558910 METTL15P1P0C7V9 234 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms