RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 ZNF493Q6ZR52 646 aa13.09□□□□□ -0.31
HMBOX1-212ENST00000558662 THAP8Q8NA92 274 aa13.09□□□□□ -0.31
HMBOX1-212ENST00000558662 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
HMBOX1-212ENST00000558662 ASXL3Q9C0F0 2248 aa13.08□□□□□ -0.32
HMBOX1-212ENST00000558662 TCRBV4S1A1TA0A5B7 111 aa13.08□□□□□ -0.32
HMBOX1-212ENST00000558662 SNAI2O43623 268 aa13.08□□□□□ -0.32
HMBOX1-212ENST00000558662 SUB1P53999 127 aaKnown RBP eCLIP13.08□□□□□ -0.32
HMBOX1-212ENST00000558662 TDHQ8IZJ6 230 aa13.08□□□□□ -0.32
HMBOX1-212ENST00000558662 SLC25A45Q8N413 288 aa13.08□□□□□ -0.32
HMBOX1-212ENST00000558662 PHLDA1Q8WV24 401 aaPredicted RBP13.08□□□□□ -0.32
HMBOX1-212ENST00000558662 CYSLTR1Q9Y271 337 aa13.08□□□□□ -0.32
HMBOX1-212ENST00000558662 U3KQK5 164 aa13.08□□□□□ -0.32
HMBOX1-212ENST00000558662 PRR33A8MZF0 331 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 C3orf80F5H4A9 247 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 AGFG2O95081 481 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 TSPAN13O95857 204 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 NCR2O95944 276 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 HBDP02042 147 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 THBDP07204 575 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 LOXL3P58215 753 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 ERHP84090 104 aaKnown RBP13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 C11orf53Q8IXP5 236 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 RFESDQ8TAC1 157 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 ITLN1Q8WWA0 313 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 RLN3Q8WXF3 142 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 PLPPR2Q96GM1 343 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 CABIN1Q9Y6J0 2220 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 IGHV5-10-1A0A0J9YXX1 117 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 FBLL1A6NHQ2 334 aaKnown RBP13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 FSTL3O95633 263 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 RFPL3SP0C7P2 107 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 COL8A1P27658 744 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 FCGR2BP31994 310 aaPredicted RBP13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 TMEM95Q3KNT9 176 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 RPL39P5Q59GN2 51 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 B4GALT7Q9UBV7 327 aa13.07□□□□□ -0.32
HMBOX1-212ENST00000558662 TRAV5A0A0B4J249 113 aa13.06□□□□□ -0.32
HMBOX1-212ENST00000558662 PGPA6NDG6 321 aa13.06□□□□□ -0.32
HMBOX1-212ENST00000558662 PYYP10082 97 aa13.06□□□□□ -0.32
HMBOX1-212ENST00000558662 ZNF137PP52743 207 aa13.06□□□□□ -0.32
HMBOX1-212ENST00000558662 FOXE3Q13461 319 aa13.06□□□□□ -0.32
HMBOX1-212ENST00000558662 MDP1Q86V88 176 aa13.06□□□□□ -0.32
HMBOX1-212ENST00000558662 SPAG8Q99932 426 aaPredicted RBP13.06□□□□□ -0.32
HMBOX1-212ENST00000558662 LINC01565O15544 149 aa13.05□□□□□ -0.32
HMBOX1-212ENST00000558662 KLRD1Q13241 179 aa13.05□□□□□ -0.32
HMBOX1-212ENST00000558662 BCL6BQ8N143 479 aaPredicted RBP13.05□□□□□ -0.32
HMBOX1-212ENST00000558662 MCRIP2Q9BUT9 160 aaKnown RBP13.05□□□□□ -0.32
HMBOX1-212ENST00000558662 TCRAP04437 139 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 ZNF138P52744 262 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 FOXG1P55316 489 aaPredicted RBP13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 IFI27L1Q96BM0 104 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 NAA38Q9BRA0 125 aaKnown RBP13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 HINT2Q9BX68 163 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 ASCC3Q8N3C0 2202 aaKnown RBP13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 KBTBD11-OT1A0A1B0GTJ5 212 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 CSN3P07498 182 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 CACNG7P62955 275 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 GAGE13Q4V321 117 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 MORN5Q5VZ52 161 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 RITA1Q96K30 269 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 FAM234AQ9H0X4 552 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 OBP2BQ9NPH6 170 aa13.04□□□□□ -0.32
HMBOX1-212ENST00000558662 A0A096LNJ9 63 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 WNT9BO14905 357 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 GCSHP23434 173 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 PRDX2P32119 198 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 ABHD17BQ5VST6 288 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 PATE2Q6UY27 113 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 LINC00322Q6ZN03 302 aaPredicted RBP13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 Q86TA4 180 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 CEND1Q8N111 149 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 RBMXL3Q8N7X1 1067 aaKnown RBP13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 OTORQ9NRC9 128 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 SPANXA1Q9NS26 97 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 KLF13Q9Y2Y9 288 aaPredicted RBP13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 CEP290O15078 2479 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 CACNA1DQ01668 2161 aa13.03□□□□□ -0.32
HMBOX1-212ENST00000558662 IGLL5B9A064 214 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 LINC01619G3V211 115 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 HOXB4P17483 251 aaPredicted RBP13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 MPV17P39210 176 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 FOLR3P41439 243 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 GNG5P63218 68 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 Q6ZS52 159 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 ZCCHC24Q8N2G6 241 aaKnown RBP13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 RND1Q92730 232 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 FAM173AQ9BQD7 235 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 CHAC1Q9BUX1 264 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 ZMAT4Q9H898 229 aa13.02□□□□□ -0.32
HMBOX1-212ENST00000558662 DYSFO75923 2080 aa13.02□□□□□ -0.33
HMBOX1-212ENST00000558662 KLRC4-KLRK1H3BQV0 150 aa13.02□□□□□ -0.33
HMBOX1-212ENST00000558662 SPINK2P20155 84 aa13.02□□□□□ -0.33
HMBOX1-212ENST00000558662 CFHR2P36980 270 aa13.02□□□□□ -0.33
HMBOX1-212ENST00000558662 NMUP48645 174 aa13.02□□□□□ -0.33
HMBOX1-212ENST00000558662 CYB561P49447 251 aa13.02□□□□□ -0.33
HMBOX1-212ENST00000558662 LINC00305Q7Z4B0 112 aa13.02□□□□□ -0.33
HMBOX1-212ENST00000558662 ZNF479Q96JC4 524 aa13.02□□□□□ -0.33
HMBOX1-212ENST00000558662 FREM1Q5H8C1 2179 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms