RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 C8orf46Q8TAG6 207 aa2.56□□□□□ -2
HERC1-203ENST00000558532 BLNKQ8WV28 456 aa2.56□□□□□ -2
HERC1-203ENST00000558532 LRRC29Q8WV35 223 aa2.56□□□□□ -2
HERC1-203ENST00000558532 TMEM190Q8WZ59 177 aa2.56□□□□□ -2
HERC1-203ENST00000558532 TSACCQ96A04 125 aaPredicted RBP2.56□□□□□ -2
HERC1-203ENST00000558532 SPACA9Q96E40 222 aaPredicted RBP2.56□□□□□ -2
HERC1-203ENST00000558532 MRAP2Q96G30 205 aa2.56□□□□□ -2
HERC1-203ENST00000558532 C5orf30Q96GV9 206 aa2.56□□□□□ -2
HERC1-203ENST00000558532 C17orf77Q96MU5 243 aa2.56□□□□□ -2
HERC1-203ENST00000558532 SIGMAR1Q99720 223 aa2.56□□□□□ -2
HERC1-203ENST00000558532 LINC00470Q9BZP3 86 aa2.56□□□□□ -2
HERC1-203ENST00000558532 PKIBQ9C010 78 aa2.56□□□□□ -2
HERC1-203ENST00000558532 ZNF331Q9NQX6 463 aaPredicted RBP2.56□□□□□ -2
HERC1-203ENST00000558532 TMEM167BQ9NRX6 74 aa2.56□□□□□ -2
HERC1-203ENST00000558532 OR1A1Q9P1Q5 309 aa2.56□□□□□ -2
HERC1-203ENST00000558532 HIGD1BQ9P298 99 aa2.56□□□□□ -2
HERC1-203ENST00000558532 TP73-AS1Q9UF72 201 aa2.56□□□□□ -2
HERC1-203ENST00000558532 C19orf25Q9UFG5 118 aaPredicted RBP2.56□□□□□ -2
HERC1-203ENST00000558532 HLA-DRB4X5D2U9 266 aa2.56□□□□□ -2
HERC1-203ENST00000558532 NCKAP5O14513 1909 aa2.56□□□□□ -2
HERC1-203ENST00000558532 DOCK11Q5JSL3 2073 aa2.56□□□□□ -2
HERC1-203ENST00000558532 RP1P56715 2156 aa2.56□□□□□ -2
HERC1-203ENST00000558532 TRAV26-1A0A087WT03 109 aa2.55□□□□□ -2
HERC1-203ENST00000558532 A0A087X0K7 114 aa2.55□□□□□ -2
HERC1-203ENST00000558532 A0A0G2JLM5 398 aa2.55□□□□□ -2
HERC1-203ENST00000558532 TEX48A0A1B0GUV7 120 aa2.55□□□□□ -2
HERC1-203ENST00000558532 SERTM2A0A1B0GWG4 89 aa2.55□□□□□ -2
HERC1-203ENST00000558532 A0A1W2PPI3 338 aa2.55□□□□□ -2
HERC1-203ENST00000558532 A0A1W2PPV4 95 aa2.55□□□□□ -2
HERC1-203ENST00000558532 HELTA6NFD8 242 aa2.55□□□□□ -2
HERC1-203ENST00000558532 SRRM4A7MD48 611 aaKnown RBP2.55□□□□□ -2
HERC1-203ENST00000558532 SHISA9B4DS77 424 aa2.55□□□□□ -2
HERC1-203ENST00000558532 GGTLC3B5MD39 225 aa2.55□□□□□ -2
HERC1-203ENST00000558532 J3QR89 54 aa2.55□□□□□ -2
HERC1-203ENST00000558532 SLC31A1O15431 190 aa2.55□□□□□ -2
HERC1-203ENST00000558532 ZNF207O43670 478 aaKnown RBP2.55□□□□□ -2
HERC1-203ENST00000558532 LEPROTL1O95214 131 aa2.55□□□□□ -2
HERC1-203ENST00000558532 GOSR1O95249 250 aa2.55□□□□□ -2
HERC1-203ENST00000558532 APOHP02749 345 aaPredicted RBP2.55□□□□□ -2
HERC1-203ENST00000558532 P04436 131 aa2.55□□□□□ -2
HERC1-203ENST00000558532 PRSS1P07477 247 aa2.55□□□□□ -2
HERC1-203ENST00000558532 PATE4P0C8F1 98 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CT45A6P0DMU7 189 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CT45A5P0DMU8 189 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CT45A10P0DMU9 189 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CT45A7P0DMV0 189 aa2.55□□□□□ -2
HERC1-203ENST00000558532 HIST1H1EP10412 219 aaKnown RBP2.55□□□□□ -2
HERC1-203ENST00000558532 ZNF32P17041 273 aa2.55□□□□□ -2
HERC1-203ENST00000558532 NTF3P20783 257 aa2.55□□□□□ -2
HERC1-203ENST00000558532 HTR1DP28221 377 aa2.55□□□□□ -2
HERC1-203ENST00000558532 DUTP33316 252 aaKnown RBP2.55□□□□□ -2
HERC1-203ENST00000558532 TNFRSF4P43489 277 aa2.55□□□□□ -2
HERC1-203ENST00000558532 RAB9AP51151 201 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CRYBA4P53673 196 aa2.55□□□□□ -2
HERC1-203ENST00000558532 MLF1P58340 268 aa2.55□□□□□ -2
HERC1-203ENST00000558532 PLP1P60201 277 aa2.55□□□□□ -2
HERC1-203ENST00000558532 ERVK11-1P61568 191 aa2.55□□□□□ -2
HERC1-203ENST00000558532 DEFB103AP81534 67 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CATR1Q13166 79 aa2.55□□□□□ -2
HERC1-203ENST00000558532 RUNX3Q13761 415 aa2.55□□□□□ -2
HERC1-203ENST00000558532 LGALS9BQ3B8N2 356 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CEACAM21Q3KPI0 293 aa2.55□□□□□ -2
HERC1-203ENST00000558532 KIAA1644Q3SXP7 199 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CT45A1Q5HYN5 189 aa2.55□□□□□ -2
HERC1-203ENST00000558532 PSMG4Q5JS54 123 aa2.55□□□□□ -2
HERC1-203ENST00000558532 LCE1FQ5T754 118 aa2.55□□□□□ -2
HERC1-203ENST00000558532 LGALS9CQ6DKI2 356 aa2.55□□□□□ -2
HERC1-203ENST00000558532 MRPL21Q7Z2W9 205 aaKnown RBP2.55□□□□□ -2
HERC1-203ENST00000558532 BPIFA4PQ86YQ2 179 aa2.55□□□□□ -2
HERC1-203ENST00000558532 MKXQ8IYA7 352 aa2.55□□□□□ -2
HERC1-203ENST00000558532 SLC22A18ASQ8N1D0 253 aa2.55□□□□□ -2
HERC1-203ENST00000558532 NUP35Q8NFH5 326 aa2.55□□□□□ -2
HERC1-203ENST00000558532 OR4X2Q8NGF9 303 aa2.55□□□□□ -2
HERC1-203ENST00000558532 OR10AG1Q8NH19 301 aa2.55□□□□□ -2
HERC1-203ENST00000558532 ATP6V0E2Q8NHE4 81 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CT45A3Q8NHU0 189 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CT55Q8WUE5 264 aa2.55□□□□□ -2
HERC1-203ENST00000558532 PHLDA1Q8WV24 401 aaPredicted RBP2.55□□□□□ -2
HERC1-203ENST00000558532 POM121L2Q96KW2 1035 aa2.55□□□□□ -2
HERC1-203ENST00000558532 DUX3Q96PT4 197 aa2.55□□□□□ -2
HERC1-203ENST00000558532 CDX2Q99626 313 aaPredicted RBP2.55□□□□□ -2
HERC1-203ENST00000558532 LITAFQ99732 161 aa2.55□□□□□ -2
HERC1-203ENST00000558532 NDFIP1Q9BT67 221 aa2.55□□□□□ -2
HERC1-203ENST00000558532 C19orf24Q9BVV8 132 aa2.55□□□□□ -2
HERC1-203ENST00000558532 OR2H1Q9GZK4 316 aa2.55□□□□□ -2
HERC1-203ENST00000558532 GFRA4Q9GZZ7 299 aa2.55□□□□□ -2
HERC1-203ENST00000558532 SPANXB1Q9NS25 103 aaPredicted RBP2.55□□□□□ -2
HERC1-203ENST00000558532 CLEC5AQ9NY25 188 aa2.55□□□□□ -2
HERC1-203ENST00000558532 IDI2-AS1Q9NZ38 188 aa2.55□□□□□ -2
HERC1-203ENST00000558532 ZNF492Q9P255 531 aa2.55□□□□□ -2
HERC1-203ENST00000558532 HSPB8Q9UJY1 196 aa2.55□□□□□ -2
HERC1-203ENST00000558532 BOKQ9UMX3 212 aaPredicted RBP2.55□□□□□ -2
HERC1-203ENST00000558532 SPCS1Q9Y6A9 102 aa2.55□□□□□ -2
HERC1-203ENST00000558532 SRCAPQ6ZRS2 3230 aa2.54□□□□□ -2
HERC1-203ENST00000558532 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.54□□□□□ -2
HERC1-203ENST00000558532 SPTY2D1-AS1A0A0U1RR47 76 aa2.54□□□□□ -2
HERC1-203ENST00000558532 A0A1W2PR77 199 aa2.54□□□□□ -2
HERC1-203ENST00000558532 C19orf71A6NCJ1 209 aa2.54□□□□□ -2
HERC1-203ENST00000558532 TMEM8BA6NDV4 472 aa2.54□□□□□ -2
HERC1-203ENST00000558532 ZNF716A6NP11 495 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms