RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 METRNQ9UJH8 293 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 C9JAW5 83 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 PAX4O43316 350 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 TCRAP04437 139 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 GLRXP35754 106 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 TMEM144Q7Z5S9 345 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 TMEM8BA6NDV4 472 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 PSCAO43653 123 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 ATP5IP56385 69 aaPredicted RBP11.57□□□□□ -0.56
SPG11-210ENST00000558319 HGFACQ04756 655 aa11.57□□□□□ -0.56
SPG11-210ENST00000558319 CACNA1DQ01668 2161 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 CD5P06127 495 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 COX5BP10606 129 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 FGFBP3Q8TAT2 258 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 RALGAPA1Q6GYQ0 2036 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.56□□□□□ -0.56
SPG11-210ENST00000558319 A0A1W2PR77 199 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 FAM90A2PQ658T7 463 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 SPACA3Q8IXA5 215 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 EXOC3-AS1Q8N2X6 119 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 MGST2Q99735 147 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 PEMTQ9UBM1 199 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 ZNF236Q9UL36 1845 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 A0A0A6YYD4 124 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 SMKR1H3BMG3 65 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 CACNG8Q8WXS5 425 aa11.56□□□□□ -0.56
SPG11-210ENST00000558319 MYOD1P15172 320 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 VMO1Q7Z5L0 202 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 MRPL52Q86TS9 123 aaKnown RBP11.55□□□□□ -0.56
SPG11-210ENST00000558319 RNF125Q96EQ8 232 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 JPT2Q9H910 190 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 ABCA7Q8IZY2 2146 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 C17orf100A8MU93 164 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 UPK2O00526 184 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 TIMM23O14925 209 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 IMMP1LQ96LU5 166 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 ANKRD36A6QL64 1941 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 IFNL4K9M1U5 179 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 ZNF688P0C7X2 276 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 C10orf55Q5SWW7 151 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 FER1L5A0AVI2 2057 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 C15orf61A6NNL5 157 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 TMEM238C9JI98 176 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 TMEM86BQ8N661 226 aa11.55□□□□□ -0.56
SPG11-210ENST00000558319 IGKV1D-8A0A087WSZ0 117 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 THBDP07204 575 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 SMIM10L1P0DMW3 83 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 FOXG1P55316 489 aaPredicted RBP11.54□□□□□ -0.56
SPG11-210ENST00000558319 SMIM10Q96HG1 83 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 KLF17Q5JT82 389 aaPredicted RBP11.54□□□□□ -0.56
SPG11-210ENST00000558319 ZIC4Q8N9L1 334 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 VWC2LB2RUY7 222 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 LINC00205P59089 165 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 REG4Q9BYZ8 158 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 CTHRC1Q96CG8 243 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 IGFBP3P17936 291 aaPredicted RBP11.54□□□□□ -0.56
SPG11-210ENST00000558319 LYZL1Q6UWQ5 148 aa11.54□□□□□ -0.56
SPG11-210ENST00000558319 ESPL1Q14674 2120 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 TRBV24-1A0A075B6N3 115 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 NBR2O15453 112 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.53□□□□□ -0.56
SPG11-210ENST00000558319 LYZL4Q96KX0 146 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 IGHV1-18A0A0C4DH31 117 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 INS-IGF2F8WCM5 200 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 INSP01308 110 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 NEU4Q8WWR8 484 aaPredicted RBP11.53□□□□□ -0.56
SPG11-210ENST00000558319 GHRHP01286 108 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 TMEM30BQ3MIR4 351 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 NUP35Q8NFH5 326 aa11.53□□□□□ -0.56
SPG11-210ENST00000558319 COL18A1P39060 1754 aa11.52□□□□□ -0.56
SPG11-210ENST00000558319 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.52□□□□□ -0.56
SPG11-210ENST00000558319 STPG4Q8N801 248 aa11.52□□□□□ -0.56
SPG11-210ENST00000558319 TUBGCP6Q96RT7 1819 aa11.52□□□□□ -0.56
SPG11-210ENST00000558319 TRBV6-7A0A0A0MS04 114 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 A0A1B0GUS0 222 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 TSSC4Q9Y5U2 329 aaPredicted RBP11.52□□□□□ -0.57
SPG11-210ENST00000558319 SYS1-DBNDD2H3BUS1 97 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 NPSP0C0P6 89 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 MORN3Q6PF18 240 aaPredicted RBP11.52□□□□□ -0.57
SPG11-210ENST00000558319 PRSS22Q9GZN4 317 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 CYTL1Q9NRR1 136 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 FAM231BA6NCW3 169 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 TM4SF5O14894 197 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 PPBPP02775 128 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
SPG11-210ENST00000558319 KLF12Q9Y4X4 402 aa11.52□□□□□ -0.57
SPG11-210ENST00000558319 COL11A2P13942 1736 aaPredicted RBP11.52□□□□□ -0.57
SPG11-210ENST00000558319 PMS2P5A8MQ11 134 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 CDK2AP2O75956 126 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 IL17RELQ6ZVW7 336 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 RPUSD1Q9UJJ7 312 aaKnown RBP11.51□□□□□ -0.57
SPG11-210ENST00000558319 NEUROG3Q9Y4Z2 214 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 MORN2Q502X0 79 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 SLC25A39Q9BZJ4 359 aaPredicted RBP11.51□□□□□ -0.57
SPG11-210ENST00000558319 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 EIF4EBP2Q13542 120 aaPredicted RBP11.51□□□□□ -0.57
SPG11-210ENST00000558319 CHAC1Q9BUX1 264 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 DOCK3Q8IZD9 2030 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 LINC01551Q86U37 167 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms